Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPSF7Q8N684 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPSF7Q8N684 AC005229.4-201ENST00000610085 2198 ntBASIC21.14■□□□□ 0.98
CPSF7Q8N684 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CPSF7Q8N684 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.14■□□□□ 0.98
CPSF7Q8N684 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CPSF7Q8N684 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CPSF7Q8N684 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPSF7Q8N684 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPSF7Q8N684 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.14■□□□□ 0.98
CPSF7Q8N684 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CPSF7Q8N684 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPSF7Q8N684 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPSF7Q8N684 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.14■□□□□ 0.97
CPSF7Q8N684 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPSF7Q8N684 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CPSF7Q8N684 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPSF7Q8N684 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.14■□□□□ 0.97
CPSF7Q8N684 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CPSF7Q8N684 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF7Q8N684 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF7Q8N684 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CPSF7Q8N684 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CPSF7Q8N684 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF7Q8N684 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF7Q8N684 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF7Q8N684 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.13■□□□□ 0.97
CPSF7Q8N684 SLC25A24-204ENST00000569674 2357 ntBASIC21.13■□□□□ 0.97
CPSF7Q8N684 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.13■□□□□ 0.97
CPSF7Q8N684 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.13■□□□□ 0.97
CPSF7Q8N684 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF7Q8N684 MIR4466-201ENST00000606121 54 ntBASIC21.13■□□□□ 0.97
CPSF7Q8N684 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.13■□□□□ 0.97
CPSF7Q8N684 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF7Q8N684 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF7Q8N684 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.12■□□□□ 0.97
CPSF7Q8N684 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CPSF7Q8N684 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF7Q8N684 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF7Q8N684 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF7Q8N684 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF7Q8N684 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CPSF7Q8N684 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.12■□□□□ 0.97
CPSF7Q8N684 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF7Q8N684 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.12■□□□□ 0.97
CPSF7Q8N684 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF7Q8N684 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF7Q8N684 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF7Q8N684 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.11■□□□□ 0.97
CPSF7Q8N684 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF7Q8N684 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CPSF7Q8N684 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.11■□□□□ 0.97
CPSF7Q8N684 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.11■□□□□ 0.97
CPSF7Q8N684 MIR6722-201ENST00000617286 78 ntBASIC21.11■□□□□ 0.97
CPSF7Q8N684 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF7Q8N684 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF7Q8N684 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CPSF7Q8N684 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CPSF7Q8N684 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.1■□□□□ 0.97
CPSF7Q8N684 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.1■□□□□ 0.97
CPSF7Q8N684 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.1■□□□□ 0.97
CPSF7Q8N684 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF7Q8N684 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
CPSF7Q8N684 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF7Q8N684 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.09■□□□□ 0.97
CPSF7Q8N684 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF7Q8N684 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.09■□□□□ 0.97
CPSF7Q8N684 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.09■□□□□ 0.97
CPSF7Q8N684 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF7Q8N684 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.09■□□□□ 0.97
CPSF7Q8N684 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.09■□□□□ 0.97
CPSF7Q8N684 AL512631.2-201ENST00000604634 923 ntBASIC21.09■□□□□ 0.97
CPSF7Q8N684 CA15P2-201ENST00000611168 834 ntBASIC21.09■□□□□ 0.97
CPSF7Q8N684 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.09■□□□□ 0.97
CPSF7Q8N684 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF7Q8N684 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF7Q8N684 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CPSF7Q8N684 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPSF7Q8N684 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPSF7Q8N684 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
CPSF7Q8N684 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPSF7Q8N684 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPSF7Q8N684 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPSF7Q8N684 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.08■□□□□ 0.97
CPSF7Q8N684 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.08■□□□□ 0.97
CPSF7Q8N684 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPSF7Q8N684 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.08■□□□□ 0.97
CPSF7Q8N684 AC009086.3-201ENST00000623486 1008 ntBASIC21.08■□□□□ 0.97
CPSF7Q8N684 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
CPSF7Q8N684 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms