Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 AC073130.3-201ENST00000624389 2278 ntBASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM1Q86UE6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 FEM1AP4-201ENST00000443167 1987 ntBASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
LRRTM1Q86UE6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 AC009102.2-201ENST00000606772 1639 ntBASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM1Q86UE6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRTM1Q86UE6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRTM1Q86UE6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRTM1Q86UE6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRTM1Q86UE6 AF106564.1-201ENST00000607058 2553 ntBASIC18.77■□□□□ 0.6
LRRTM1Q86UE6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRTM1Q86UE6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRTM1Q86UE6 AC021242.3-201ENST00000607598 1377 ntBASIC18.77■□□□□ 0.6
LRRTM1Q86UE6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRRTM1Q86UE6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRRTM1Q86UE6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRTM1Q86UE6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.77■□□□□ 0.59
LRRTM1Q86UE6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
LRRTM1Q86UE6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRTM1Q86UE6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
LRRTM1Q86UE6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRTM1Q86UE6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM1Q86UE6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 KRT8P33-201ENST00000508125 1423 ntBASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM1Q86UE6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms