Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AL139246.5-201ENST00000606645 996 ntBASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 AC110285.6-201ENST00000617652 491 ntBASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 AC005229.4-201ENST00000610085 2198 ntBASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 DUX4L4-201ENST00000566884 1269 ntBASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 AC009102.2-201ENST00000606772 1639 ntBASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDHR3Q6ZTQ4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDHR3Q6ZTQ4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.73■■□□□ 1.07
CDHR3Q6ZTQ4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 AC009086.3-201ENST00000623486 1008 ntBASIC21.72■■□□□ 1.07
CDHR3Q6ZTQ4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.71■■□□□ 1.07
CDHR3Q6ZTQ4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDHR3Q6ZTQ4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 AC004687.1-201ENST00000579003 1625 ntBASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 MIR638-201ENST00000385237 100 ntBASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDHR3Q6ZTQ4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDHR3Q6ZTQ4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms