Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 AL353708.3-201ENST00000610272 989 ntBASIC11.81□□□□□ -0.52
RNF213Q63HN8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 AC139426.1-201ENST00000568218 2529 ntBASIC11.81□□□□□ -0.52
RNF213Q63HN8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC11.8□□□□□ -0.52
RNF213Q63HN8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RNF213Q63HN8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC11.8□□□□□ -0.52
RNF213Q63HN8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF213Q63HN8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
RNF213Q63HN8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC11.8□□□□□ -0.52
RNF213Q63HN8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
RNF213Q63HN8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RNF213Q63HN8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC11.79□□□□□ -0.52
RNF213Q63HN8 AC008403.3-201ENST00000598924 454 ntBASIC11.79□□□□□ -0.52
RNF213Q63HN8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC11.79□□□□□ -0.52
RNF213Q63HN8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC11.79□□□□□ -0.52
RNF213Q63HN8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF213Q63HN8 KRT18P56-201ENST00000507275 550 ntBASIC11.79□□□□□ -0.52
RNF213Q63HN8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF213Q63HN8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
RNF213Q63HN8 AC097639.1-201ENST00000565519 1891 ntBASIC11.78□□□□□ -0.52
RNF213Q63HN8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF213Q63HN8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF213Q63HN8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 AL022069.1-201ENST00000568025 1636 ntBASIC11.78□□□□□ -0.52
RNF213Q63HN8 AC012618.2-201ENST00000428058 849 ntBASIC11.78□□□□□ -0.52
RNF213Q63HN8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF213Q63HN8 ERN1-208ENST00000606895 2068 ntBASIC11.78□□□□□ -0.52
RNF213Q63HN8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 AC007322.4-201ENST00000509611 723 ntBASIC11.78□□□□□ -0.52
RNF213Q63HN8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF213Q63HN8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF213Q63HN8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF213Q63HN8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF213Q63HN8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF213Q63HN8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC11.78□□□□□ -0.52
RNF213Q63HN8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
RNF213Q63HN8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RNF213Q63HN8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.77□□□□□ -0.52
RNF213Q63HN8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RNF213Q63HN8 AC008694.1-202ENST00000636953 945 ntBASIC11.77□□□□□ -0.52
RNF213Q63HN8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF213Q63HN8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF213Q63HN8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.77□□□□□ -0.53
RNF213Q63HN8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF213Q63HN8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC11.77□□□□□ -0.53
RNF213Q63HN8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF213Q63HN8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF213Q63HN8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF213Q63HN8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RNF213Q63HN8 RPS2P55-201ENST00000397318 883 ntBASIC11.77□□□□□ -0.53
RNF213Q63HN8 AC107956.1-201ENST00000494359 873 ntBASIC11.77□□□□□ -0.53
RNF213Q63HN8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms