Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIF1Q5T3J3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 TSPY9P-201ENST00000440215 945 ntBASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 TSPY11P-201ENST00000442607 1045 ntBASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 AC241377.3-202ENST00000626088 1088 ntBASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 AC241585.3-202ENST00000628937 1088 ntBASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 AC245100.8-202ENST00000629247 1058 ntBASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.45■□□□□ 0.86
LRIF1Q5T3J3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 AL117332.1-201ENST00000622628 974 ntBASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 AC005229.4-201ENST00000610085 2198 ntBASIC20.44■□□□□ 0.86
LRIF1Q5T3J3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 AC079089.2-201ENST00000531211 1277 ntBASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 MIR6724-1-201ENST00000616420 92 ntBASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 MIR6724-2-201ENST00000616483 92 ntBASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 MIR6724-4-201ENST00000617390 92 ntBASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 MIR6724-3-201ENST00000622482 92 ntBASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LRIF1Q5T3J3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 Z98882.1-201ENST00000622160 2253 ntBASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIF1Q5T3J3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 RARRES2P1-201ENST00000474487 481 ntBASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 AC009299.2-201ENST00000482477 511 ntBASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 AL451085.2-201ENST00000605085 799 ntBASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIF1Q5T3J3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 AC133637.1-201ENST00000624115 1537 ntBASIC20.4■□□□□ 0.86
LRIF1Q5T3J3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRIF1Q5T3J3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRIF1Q5T3J3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LRIF1Q5T3J3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRIF1Q5T3J3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
LRIF1Q5T3J3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.39■□□□□ 0.86
LRIF1Q5T3J3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms