Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.62■□□□□ 0.73
RNFT1Q5M7Z0 RAP2CP1-201ENST00000605103 478 ntBASIC19.62■□□□□ 0.73
RNFT1Q5M7Z0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 ID1-201ENST00000376105 1233 ntBASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 KRT19P1-201ENST00000405746 1186 ntBASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 AC073111.5-205ENST00000641717 521 ntBASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNFT1Q5M7Z0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNFT1Q5M7Z0 AC093323.1-202ENST00000635031 2045 ntBASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 ESRRAP2-201ENST00000418437 1549 ntBASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 AC009237.3-201ENST00000393279 1427 ntBASIC19.59■□□□□ 0.73
RNFT1Q5M7Z0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNFT1Q5M7Z0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNFT1Q5M7Z0 DUSP8P5-201ENST00000422884 1815 ntBASIC19.58■□□□□ 0.73
RNFT1Q5M7Z0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNFT1Q5M7Z0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.58■□□□□ 0.73
RNFT1Q5M7Z0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 AC079089.2-201ENST00000531211 1277 ntBASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.58■□□□□ 0.72
RNFT1Q5M7Z0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNFT1Q5M7Z0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 BID-214ENST00000617586 542 ntTSL 5 BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNFT1Q5M7Z0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 AC104187.1-201ENST00000607510 612 ntBASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.55■□□□□ 0.72
RNFT1Q5M7Z0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RNFT1Q5M7Z0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RNFT1Q5M7Z0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.54■□□□□ 0.72
RNFT1Q5M7Z0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.54■□□□□ 0.72
RNFT1Q5M7Z0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNFT1Q5M7Z0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNFT1Q5M7Z0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms