Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 AL034346.1-201ENST00000568244 1277 ntBASIC21.55■■□□□ 1.04
LRRK1Q38SD2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 AC092437.1-201ENST00000624794 1048 ntBASIC21.55■■□□□ 1.04
LRRK1Q38SD2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRK1Q38SD2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 AC016769.1-201ENST00000409132 1010 ntBASIC21.53■■□□□ 1.04
LRRK1Q38SD2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 OR7E47P-201ENST00000546390 1422 ntBASIC21.53■■□□□ 1.04
LRRK1Q38SD2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 AC127496.7-201ENST00000625110 1798 ntBASIC21.53■■□□□ 1.04
LRRK1Q38SD2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRK1Q38SD2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK1Q38SD2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 AP004607.4-201ENST00000530158 1459 ntBASIC21.51■■□□□ 1.03
LRRK1Q38SD2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 C1orf229-201ENST00000623686 2258 ntBASIC21.51■■□□□ 1.03
LRRK1Q38SD2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRK1Q38SD2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 AC137767.1-201ENST00000602918 1920 ntBASIC21.5■■□□□ 1.03
LRRK1Q38SD2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 AC022517.1-201ENST00000592429 346 ntBASIC21.5■■□□□ 1.03
LRRK1Q38SD2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LRRK1Q38SD2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRK1Q38SD2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.49■■□□□ 1.03
LRRK1Q38SD2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRK1Q38SD2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.49■■□□□ 1.03
LRRK1Q38SD2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRK1Q38SD2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRK1Q38SD2 OXCT2P1-201ENST00000447263 1535 ntBASIC21.49■■□□□ 1.03
LRRK1Q38SD2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRK1Q38SD2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRK1Q38SD2 AC004854.2-201ENST00000608450 1441 ntBASIC21.49■■□□□ 1.03
LRRK1Q38SD2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRK1Q38SD2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms