Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC087742.1-201ENST00000575880 1738 ntBASIC20.56■□□□□ 0.88
SKP1P63208 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SKP1P63208 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.56■□□□□ 0.88
SKP1P63208 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.56■□□□□ 0.88
SKP1P63208 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.56■□□□□ 0.88
SKP1P63208 AC012414.1-201ENST00000556676 535 ntBASIC20.56■□□□□ 0.88
SKP1P63208 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
SKP1P63208 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.56■□□□□ 0.88
SKP1P63208 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SKP1P63208 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKP1P63208 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SKP1P63208 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKP1P63208 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SKP1P63208 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKP1P63208 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.55■□□□□ 0.88
SKP1P63208 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKP1P63208 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.55■□□□□ 0.88
SKP1P63208 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.55■□□□□ 0.88
SKP1P63208 OR7E47P-201ENST00000546390 1422 ntBASIC20.55■□□□□ 0.88
SKP1P63208 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKP1P63208 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKP1P63208 AC127496.7-201ENST00000625110 1798 ntBASIC20.55■□□□□ 0.88
SKP1P63208 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKP1P63208 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.55■□□□□ 0.88
SKP1P63208 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.55■□□□□ 0.88
SKP1P63208 ZNRF2P3-201ENST00000424200 374 ntBASIC20.55■□□□□ 0.88
SKP1P63208 AL034346.1-201ENST00000568244 1277 ntBASIC20.55■□□□□ 0.88
SKP1P63208 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKP1P63208 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKP1P63208 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.55■□□□□ 0.88
SKP1P63208 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SKP1P63208 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SKP1P63208 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.54■□□□□ 0.88
SKP1P63208 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SKP1P63208 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.54■□□□□ 0.88
SKP1P63208 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.54■□□□□ 0.88
SKP1P63208 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.54■□□□□ 0.88
SKP1P63208 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SKP1P63208 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.54■□□□□ 0.88
SKP1P63208 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.54■□□□□ 0.88
SKP1P63208 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.54■□□□□ 0.88
SKP1P63208 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.54■□□□□ 0.88
SKP1P63208 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SKP1P63208 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.54■□□□□ 0.88
SKP1P63208 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKP1P63208 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SKP1P63208 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SKP1P63208 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SKP1P63208 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.53■□□□□ 0.88
SKP1P63208 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKP1P63208 C1orf229-201ENST00000623686 2258 ntBASIC20.53■□□□□ 0.88
SKP1P63208 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKP1P63208 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SKP1P63208 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.53■□□□□ 0.88
SKP1P63208 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SKP1P63208 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SKP1P63208 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SKP1P63208 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SKP1P63208 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SKP1P63208 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SKP1P63208 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SKP1P63208 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.52■□□□□ 0.88
SKP1P63208 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SKP1P63208 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SKP1P63208 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKP1P63208 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SKP1P63208 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKP1P63208 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SKP1P63208 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKP1P63208 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKP1P63208 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKP1P63208 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKP1P63208 C9orf163-202ENST00000624034 2573 ntBASIC20.51■□□□□ 0.87
SKP1P63208 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.51■□□□□ 0.87
SKP1P63208 AC137767.1-201ENST00000602918 1920 ntBASIC20.51■□□□□ 0.87
SKP1P63208 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SKP1P63208 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SKP1P63208 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SKP1P63208 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SKP1P63208 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SKP1P63208 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SKP1P63208 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SKP1P63208 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SKP1P63208 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SKP1P63208 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SKP1P63208 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SKP1P63208 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.5■□□□□ 0.87
SKP1P63208 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.5■□□□□ 0.87
SKP1P63208 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.5■□□□□ 0.87
SKP1P63208 SMUG1P1-201ENST00000590640 811 ntBASIC20.5■□□□□ 0.87
SKP1P63208 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SKP1P63208 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.5■□□□□ 0.87
SKP1P63208 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.5■□□□□ 0.87
SKP1P63208 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SKP1P63208 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SKP1P63208 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SKP1P63208 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SKP1P63208 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SKP1P63208 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SKP1P63208 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms