Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM11AP58511 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM11AP58511 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM11AP58511 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SMIM11AP58511 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SMIM11AP58511 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM11AP58511 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SMIM11AP58511 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.95■□□□□ 0.78
SMIM11AP58511 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.95■□□□□ 0.78
SMIM11AP58511 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SMIM11AP58511 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SMIM11AP58511 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.95■□□□□ 0.78
SMIM11AP58511 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.95■□□□□ 0.78
SMIM11AP58511 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM11AP58511 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM11AP58511 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SMIM11AP58511 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMIM11AP58511 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SMIM11AP58511 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.94■□□□□ 0.78
SMIM11AP58511 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 AL499627.2-201ENST00000606283 725 ntBASIC19.94■□□□□ 0.78
SMIM11AP58511 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.94■□□□□ 0.78
SMIM11AP58511 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.94■□□□□ 0.78
SMIM11AP58511 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.94■□□□□ 0.78
SMIM11AP58511 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM11AP58511 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM11AP58511 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM11AP58511 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.93■□□□□ 0.78
SMIM11AP58511 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM11AP58511 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SMIM11AP58511 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM11AP58511 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM11AP58511 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM11AP58511 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.93■□□□□ 0.78
SMIM11AP58511 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.92■□□□□ 0.78
SMIM11AP58511 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMIM11AP58511 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMIM11AP58511 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.92■□□□□ 0.78
SMIM11AP58511 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM11AP58511 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SMIM11AP58511 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM11AP58511 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM11AP58511 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM11AP58511 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM11AP58511 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM11AP58511 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SMIM11AP58511 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM11AP58511 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
SMIM11AP58511 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.91■□□□□ 0.78
SMIM11AP58511 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.91■□□□□ 0.78
SMIM11AP58511 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM11AP58511 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM11AP58511 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SMIM11AP58511 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM11AP58511 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMIM11AP58511 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.9■□□□□ 0.78
SMIM11AP58511 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.9■□□□□ 0.78
SMIM11AP58511 AC010997.5-201ENST00000609182 354 ntBASIC19.9■□□□□ 0.78
SMIM11AP58511 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM11AP58511 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SMIM11AP58511 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM11AP58511 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM11AP58511 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.9■□□□□ 0.78
SMIM11AP58511 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM11AP58511 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM11AP58511 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.89■□□□□ 0.78
SMIM11AP58511 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM11AP58511 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM11AP58511 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM11AP58511 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM11AP58511 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM11AP58511 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
SMIM11AP58511 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM11AP58511 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.89■□□□□ 0.77
SMIM11AP58511 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SMIM11AP58511 MIR4787-201ENST00000607364 84 ntBASIC19.89■□□□□ 0.77
SMIM11AP58511 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM11AP58511 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM11AP58511 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM11AP58511 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMIM11AP58511 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM11AP58511 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms