Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.22■□□□□ 0.83
SMSP52788 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.21■□□□□ 0.83
SMSP52788 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMSP52788 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMSP52788 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMSP52788 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SMSP52788 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMSP52788 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SMSP52788 AC092053.2-201ENST00000640557 1818 ntBASIC20.21■□□□□ 0.83
SMSP52788 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.21■□□□□ 0.83
SMSP52788 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SMSP52788 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMSP52788 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMSP52788 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMSP52788 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SMSP52788 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMSP52788 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMSP52788 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMSP52788 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMSP52788 BX842568.3-201ENST00000418104 571 ntBASIC20.2■□□□□ 0.82
SMSP52788 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.2■□□□□ 0.82
SMSP52788 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMSP52788 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMSP52788 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.2■□□□□ 0.82
SMSP52788 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.2■□□□□ 0.82
SMSP52788 C17orf82-201ENST00000623772 1530 ntBASIC20.2■□□□□ 0.82
SMSP52788 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.2■□□□□ 0.82
SMSP52788 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMSP52788 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMSP52788 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMSP52788 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SMSP52788 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.19■□□□□ 0.82
SMSP52788 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.19■□□□□ 0.82
SMSP52788 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.19■□□□□ 0.82
SMSP52788 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMSP52788 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.19■□□□□ 0.82
SMSP52788 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMSP52788 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMSP52788 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.19■□□□□ 0.82
SMSP52788 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.19■□□□□ 0.82
SMSP52788 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMSP52788 AC009086.3-201ENST00000623486 1008 ntBASIC20.19■□□□□ 0.82
SMSP52788 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMSP52788 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMSP52788 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.19■□□□□ 0.82
SMSP52788 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
SMSP52788 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.19■□□□□ 0.82
SMSP52788 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
SMSP52788 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMSP52788 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SMSP52788 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMSP52788 AC139530.1-201ENST00000575312 1977 ntBASIC20.18■□□□□ 0.82
SMSP52788 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMSP52788 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.18■□□□□ 0.82
SMSP52788 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
SMSP52788 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMSP52788 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.18■□□□□ 0.82
SMSP52788 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMSP52788 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.18■□□□□ 0.82
SMSP52788 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SMSP52788 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SMSP52788 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMSP52788 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
SMSP52788 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.18■□□□□ 0.82
SMSP52788 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SMSP52788 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMSP52788 C11orf96-202ENST00000528572 1834 ntBASIC20.18■□□□□ 0.82
SMSP52788 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.18■□□□□ 0.82
SMSP52788 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMSP52788 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.17■□□□□ 0.82
SMSP52788 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.17■□□□□ 0.82
SMSP52788 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SMSP52788 AC034268.1-201ENST00000441047 882 ntBASIC20.17■□□□□ 0.82
SMSP52788 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
SMSP52788 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
SMSP52788 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.16■□□□□ 0.82
SMSP52788 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMSP52788 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SMSP52788 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMSP52788 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SMSP52788 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.16■□□□□ 0.82
SMSP52788 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMSP52788 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.16■□□□□ 0.82
SMSP52788 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.16■□□□□ 0.82
SMSP52788 AC007375.3-201ENST00000600936 2314 ntBASIC20.16■□□□□ 0.82
SMSP52788 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMSP52788 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMSP52788 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SMSP52788 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMSP52788 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMSP52788 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
SMSP52788 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMSP52788 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMSP52788 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMSP52788 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.15■□□□□ 0.82
SMSP52788 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SMSP52788 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms