Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.43■□□□□ 0.54
MECP2P51608 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MECP2P51608 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MECP2P51608 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.43■□□□□ 0.54
MECP2P51608 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MECP2P51608 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
MECP2P51608 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MECP2P51608 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MECP2P51608 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MECP2P51608 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MECP2P51608 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.42■□□□□ 0.54
MECP2P51608 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
MECP2P51608 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MECP2P51608 AL592295.1-201ENST00000400984 884 ntBASIC18.42■□□□□ 0.54
MECP2P51608 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.42■□□□□ 0.54
MECP2P51608 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MECP2P51608 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.42■□□□□ 0.54
MECP2P51608 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MECP2P51608 FEM1AP4-201ENST00000443167 1987 ntBASIC18.42■□□□□ 0.54
MECP2P51608 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MECP2P51608 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MECP2P51608 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MECP2P51608 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 Z98882.1-201ENST00000622160 2253 ntBASIC18.41■□□□□ 0.54
MECP2P51608 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MECP2P51608 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 AC129492.7-201ENST00000622992 756 ntBASIC18.41■□□□□ 0.54
MECP2P51608 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
MECP2P51608 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
MECP2P51608 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MECP2P51608 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.41■□□□□ 0.54
MECP2P51608 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MECP2P51608 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MECP2P51608 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.4■□□□□ 0.54
MECP2P51608 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MECP2P51608 SPCS2P3-201ENST00000500401 656 ntBASIC18.4■□□□□ 0.54
MECP2P51608 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.4■□□□□ 0.54
MECP2P51608 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
MECP2P51608 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MECP2P51608 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MECP2P51608 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MECP2P51608 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MECP2P51608 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MECP2P51608 AC004987.1-201ENST00000428627 508 ntBASIC18.39■□□□□ 0.53
MECP2P51608 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.39■□□□□ 0.53
MECP2P51608 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MECP2P51608 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MECP2P51608 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MECP2P51608 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
MECP2P51608 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MECP2P51608 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
MECP2P51608 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MECP2P51608 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.38■□□□□ 0.53
MECP2P51608 DUX4L9-201ENST00000449051 1259 ntBASIC18.38■□□□□ 0.53
MECP2P51608 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.38■□□□□ 0.53
MECP2P51608 AC087393.1-201ENST00000582896 145 ntBASIC18.38■□□□□ 0.53
MECP2P51608 AC007952.6-201ENST00000573168 2673 ntBASIC18.38■□□□□ 0.53
MECP2P51608 AC003957.1-201ENST00000625108 2673 ntBASIC18.38■□□□□ 0.53
MECP2P51608 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.38■□□□□ 0.53
MECP2P51608 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MECP2P51608 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 ATP5G2P3-201ENST00000429083 425 ntBASIC18.37■□□□□ 0.53
MECP2P51608 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MECP2P51608 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MECP2P51608 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms