Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.01■■□□□ 1.11
GRIA1P42261 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.01■■□□□ 1.11
GRIA1P42261 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GRIA1P42261 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
GRIA1P42261 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GRIA1P42261 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.01■■□□□ 1.11
GRIA1P42261 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GRIA1P42261 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22■■□□□ 1.11
GRIA1P42261 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22■■□□□ 1.11
GRIA1P42261 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GRIA1P42261 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22■■□□□ 1.11
GRIA1P42261 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22■■□□□ 1.11
GRIA1P42261 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22■■□□□ 1.11
GRIA1P42261 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22■■□□□ 1.11
GRIA1P42261 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
GRIA1P42261 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
GRIA1P42261 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
GRIA1P42261 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22■■□□□ 1.11
GRIA1P42261 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22■■□□□ 1.11
GRIA1P42261 FAM99A-202ENST00000538190 1989 ntBASIC21.99■■□□□ 1.11
GRIA1P42261 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.99■■□□□ 1.11
GRIA1P42261 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GRIA1P42261 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GRIA1P42261 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
GRIA1P42261 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GRIA1P42261 OR2I1P-207ENST00000453522 948 ntBASIC21.99■■□□□ 1.11
GRIA1P42261 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.99■■□□□ 1.11
GRIA1P42261 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.99■■□□□ 1.11
GRIA1P42261 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
GRIA1P42261 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GRIA1P42261 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GRIA1P42261 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
GRIA1P42261 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.98■■□□□ 1.11
GRIA1P42261 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GRIA1P42261 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.98■■□□□ 1.11
GRIA1P42261 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
GRIA1P42261 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.98■■□□□ 1.11
GRIA1P42261 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GRIA1P42261 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
GRIA1P42261 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.98■■□□□ 1.11
GRIA1P42261 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GRIA1P42261 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.97■■□□□ 1.11
GRIA1P42261 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.97■■□□□ 1.11
GRIA1P42261 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GRIA1P42261 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.97■■□□□ 1.11
GRIA1P42261 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.97■■□□□ 1.11
GRIA1P42261 AC092171.4-201ENST00000609130 632 ntBASIC21.97■■□□□ 1.11
GRIA1P42261 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GRIA1P42261 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
GRIA1P42261 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.97■■□□□ 1.11
GRIA1P42261 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GRIA1P42261 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GRIA1P42261 SYT6-210ENST00000641643 1587 ntBASIC21.96■■□□□ 1.11
GRIA1P42261 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GRIA1P42261 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.96■■□□□ 1.11
GRIA1P42261 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GRIA1P42261 AC079089.2-201ENST00000531211 1277 ntBASIC21.96■■□□□ 1.11
GRIA1P42261 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.96■■□□□ 1.11
GRIA1P42261 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.96■■□□□ 1.11
GRIA1P42261 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.96■■□□□ 1.11
GRIA1P42261 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.96■■□□□ 1.11
GRIA1P42261 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.96■■□□□ 1.11
GRIA1P42261 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
GRIA1P42261 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.96■■□□□ 1.11
GRIA1P42261 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GRIA1P42261 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
GRIA1P42261 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GRIA1P42261 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GRIA1P42261 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
GRIA1P42261 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GRIA1P42261 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GRIA1P42261 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
GRIA1P42261 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.95■■□□□ 1.1
GRIA1P42261 AC026471.6-201ENST00000622954 1905 ntBASIC21.95■■□□□ 1.1
GRIA1P42261 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
GRIA1P42261 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
GRIA1P42261 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.95■■□□□ 1.1
GRIA1P42261 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.95■■□□□ 1.1
GRIA1P42261 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GRIA1P42261 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
GRIA1P42261 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 AC026310.3-201ENST00000625186 2373 ntBASIC21.94■■□□□ 1.1
GRIA1P42261 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
GRIA1P42261 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
GRIA1P42261 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
GRIA1P42261 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
GRIA1P42261 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIA1P42261 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIA1P42261 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIA1P42261 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIA1P42261 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
GRIA1P42261 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GRIA1P42261 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms