Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 YOR073W-AYOR073W-A 234 nt3.07□□□□□ -1.92
LSM4P40070 RNR1YER070W 2667 nt3.07□□□□□ -1.92
LSM4P40070 HOS2YGL194C 1359 nt3.07□□□□□ -1.92
LSM4P40070 RRP5YMR229C 5190 nt3.07□□□□□ -1.92
LSM4P40070 RPN1YHR027C 2982 nt3.06□□□□□ -1.92
LSM4P40070 COS7YDL248W 1152 nt3.06□□□□□ -1.92
LSM4P40070 ARO80YDR421W 2853 nt3.06□□□□□ -1.92
LSM4P40070 SER3YER081W 1410 nt3.06□□□□□ -1.92
LSM4P40070 PUG1YER185W 912 nt3.06□□□□□ -1.92
LSM4P40070 COS5YJR161C 1152 nt3.06□□□□□ -1.92
LSM4P40070 YLR049CYLR049C 1287 nt3.06□□□□□ -1.92
LSM4P40070 URA4YLR420W 1095 nt3.06□□□□□ -1.92
LSM4P40070 YMR147WYMR147W 672 nt3.06□□□□□ -1.92
LSM4P40070 PFA4YOL003C 1137 nt3.06□□□□□ -1.92
LSM4P40070 CAT5YOR125C 702 nt3.06□□□□□ -1.92
LSM4P40070 YNR065CYNR065C 3351 nt3.05□□□□□ -1.92
LSM4P40070 PGS1YCL004W 1566 nt3.05□□□□□ -1.92
LSM4P40070 FAS1YKL182W 6156 nt3.05□□□□□ -1.92
LSM4P40070 PAU10YDR542W 363 nt3.05□□□□□ -1.92
LSM4P40070 PAU11YGL261C 363 nt3.05□□□□□ -1.92
LSM4P40070 PAU13YHL046C 363 nt3.05□□□□□ -1.92
LSM4P40070 YAL004WYAL004W 648 nt3.05□□□□□ -1.92
LSM4P40070 RNH203YLR154C 333 nt3.05□□□□□ -1.92
LSM4P40070 PAU4YLR461W 363 nt3.05□□□□□ -1.92
LSM4P40070 YPT7YML001W 627 nt3.05□□□□□ -1.92
LSM4P40070 YBL036CYBL036C 774 nt3.05□□□□□ -1.92
LSM4P40070 RIB4YOL143C 510 nt3.05□□□□□ -1.92
LSM4P40070 UTP25YIL091C 2166 nt3.05□□□□□ -1.92
LSM4P40070 MIT1YEL007W 2001 nt3.05□□□□□ -1.92
LSM4P40070 SQS1YNL224C 2304 nt3.04□□□□□ -1.92
LSM4P40070 PRP3YDR473C 1410 nt3.04□□□□□ -1.92
LSM4P40070 KTR6YPL053C 1341 nt3.04□□□□□ -1.92
LSM4P40070 YEL028WYEL028W 462 nt3.04□□□□□ -1.92
LSM4P40070 OKP1YGR179C 1221 nt3.04□□□□□ -1.92
LSM4P40070 YIR040CYIR040C 333 nt3.04□□□□□ -1.92
LSM4P40070 DCS1YLR270W 1053 nt3.04□□□□□ -1.92
LSM4P40070 GIS2YNL255C 462 nt3.04□□□□□ -1.92
LSM4P40070 YOR186WYOR186W 435 nt3.04□□□□□ -1.92
LSM4P40070 YPR108W-AYPR108W-A 213 nt3.04□□□□□ -1.92
LSM4P40070 TIM12YBR091C 330 nt3.04□□□□□ -1.92
LSM4P40070 YDL180WYDL180W 1644 nt3.04□□□□□ -1.92
LSM4P40070 YBR138CYBR138C 1575 nt3.04□□□□□ -1.92
LSM4P40070 TRS120YDR407C 3870 nt3.03□□□□□ -1.92
LSM4P40070 CPA2YJR109C 3357 nt3.03□□□□□ -1.92
LSM4P40070 ALG1YBR110W 1350 nt3.03□□□□□ -1.92
LSM4P40070 YNL013CYNL013C 378 nt3.03□□□□□ -1.92
LSM4P40070 YBL065WYBL065W 345 nt3.03□□□□□ -1.92
LSM4P40070 YOR008W-BYOR008W-B 102 nt3.03□□□□□ -1.92
LSM4P40070 YPR015CYPR015C 744 nt3.03□□□□□ -1.92
LSM4P40070 YPR150WYPR150W 522 nt3.03□□□□□ -1.92
LSM4P40070 SLM2YNL047C 1971 nt3.03□□□□□ -1.92
LSM4P40070 CSR2YPR030W 3366 nt3.03□□□□□ -1.93
LSM4P40070 SPB4YFL002C 1821 nt3.03□□□□□ -1.93
LSM4P40070 ENA2YDR039C 3276 nt3.02□□□□□ -1.93
LSM4P40070 ENA1YDR040C 3276 nt3.02□□□□□ -1.93
LSM4P40070 TRX3YCR083W 384 nt3.02□□□□□ -1.93
LSM4P40070 ERJ5YFR041C 888 nt3.02□□□□□ -1.93
LSM4P40070 YGR051CYGR051C 324 nt3.02□□□□□ -1.93
LSM4P40070 FMC1YIL098C 468 nt3.02□□□□□ -1.93
LSM4P40070 YLR462WYLR462W 609 nt3.02□□□□□ -1.93
LSM4P40070 SSO2YMR183C 888 nt3.02□□□□□ -1.93
LSM4P40070 PSF3YOL146W 585 nt3.02□□□□□ -1.93
LSM4P40070 CHK1YBR274W 1584 nt3.02□□□□□ -1.93
LSM4P40070 LCB5YLR260W 2064 nt3.02□□□□□ -1.93
LSM4P40070 POL2YNL262W 6669 nt3.02□□□□□ -1.93
LSM4P40070 FKH2YNL068C 2589 nt3.02□□□□□ -1.93
LSM4P40070 TED1YIL039W 1422 nt3.02□□□□□ -1.93
LSM4P40070 VPS53YJL029C 2469 nt3.01□□□□□ -1.93
LSM4P40070 ERG9YHR190W 1335 nt3.01□□□□□ -1.93
LSM4P40070 YDR149CYDR149C 708 nt3.01□□□□□ -1.93
LSM4P40070 tF(GAA)DtF(GAA)D 73 nt3.01□□□□□ -1.93
LSM4P40070 tF(GAA)NtF(GAA)N 73 nt3.01□□□□□ -1.93
LSM4P40070 PFA5YDR459C 1125 nt3.01□□□□□ -1.93
LSM4P40070 GTF1YGR102C 552 nt3.01□□□□□ -1.93
LSM4P40070 BET1YIL004C 429 nt3.01□□□□□ -1.93
LSM4P40070 APC9YLR102C 798 nt3.01□□□□□ -1.93
LSM4P40070 RHO5YNL180C 996 nt3.01□□□□□ -1.93
LSM4P40070 YOL079WYOL079W 399 nt3.01□□□□□ -1.93
LSM4P40070 TMC1YOR052C 453 nt3.01□□□□□ -1.93
LSM4P40070 OSW1YOR255W 837 nt3.01□□□□□ -1.93
LSM4P40070 RIB5YBR256C 717 nt3.01□□□□□ -1.93
LSM4P40070 CAF130YGR134W 3369 nt3.01□□□□□ -1.93
LSM4P40070 APM1YPL259C 1428 nt3.01□□□□□ -1.93
LSM4P40070 PKH1YDR490C 2301 nt3.01□□□□□ -1.93
LSM4P40070 IMH1YLR309C 2736 nt3□□□□□ -1.93
LSM4P40070 NEM1YHR004C 1341 nt3□□□□□ -1.93
LSM4P40070 WHI4YDL224C 1950 nt3□□□□□ -1.93
LSM4P40070 YCR101CYCR101C 549 nt3□□□□□ -1.93
LSM4P40070 YDR271CYDR271C 372 nt3□□□□□ -1.93
LSM4P40070 YEL032C-AYEL032C-A 162 nt3□□□□□ -1.93
LSM4P40070 NSA2YER126C 786 nt3□□□□□ -1.93
LSM4P40070 YGL082WYGL082W 1146 nt3□□□□□ -1.93
LSM4P40070 MTC3YGL226W 372 nt3□□□□□ -1.93
LSM4P40070 ENT3YJR125C 1227 nt3□□□□□ -1.93
LSM4P40070 RPS31YLR167W 459 nt3□□□□□ -1.93
LSM4P40070 IMP4YNL075W 873 nt3□□□□□ -1.93
LSM4P40070 SKP2YNL311C 2292 nt3□□□□□ -1.93
LSM4P40070 RPN2YIL075C 2838 nt3□□□□□ -1.93
LSM4P40070 FRE4YNR060W 2160 nt3□□□□□ -1.93
LSM4P40070 PTM1YKL039W 1572 nt3□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 19.2 ms