Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeast

Predictions only

Length 992 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS41	P38959	YGL108C	YGL108C	423 nt		4.26	□□□□□ -1.73
VPS41	P38959	GON7	YJL184W	372 nt		4.26	□□□□□ -1.73
VPS41	P38959	CMC1	YKL137W	336 nt		4.26	□□□□□ -1.73
VPS41	P38959	YKL177W	YKL177W	339 nt		4.26	□□□□□ -1.73
VPS41	P38959	YLR428C	YLR428C	345 nt		4.26	□□□□□ -1.73
VPS41	P38959	SPC2	YML055W	537 nt		4.26	□□□□□ -1.73
VPS41	P38959	YPR071W	YPR071W	636 nt		4.26	□□□□□ -1.73
VPS41	P38959	RPS9B	YBR189W	588 nt		4.26	□□□□□ -1.73
VPS41	P38959	SER3	YER081W	1410 nt		4.26	□□□□□ -1.73
VPS41	P38959	URC2	YDR520C	2319 nt		4.25	□□□□□ -1.73
VPS41	P38959	RTA1	YGR213C	954 nt		4.25	□□□□□ -1.73
VPS41	P38959	IES3	YLR052W	753 nt		4.25	□□□□□ -1.73
VPS41	P38959	YLR154W-B	YLR154W-B	165 nt		4.25	□□□□□ -1.73
VPS41	P38959	RRG9	YNL213C	645 nt		4.25	□□□□□ -1.73
VPS41	P38959	YBR013C	YBR013C	390 nt		4.25	□□□□□ -1.73
VPS41	P38959	PNG1	YPL096W	1092 nt		4.25	□□□□□ -1.73
VPS41	P38959	MGR2	YPL098C	342 nt		4.25	□□□□□ -1.73
VPS41	P38959	VPS69	YPR087W	321 nt		4.25	□□□□□ -1.73
VPS41	P38959	MRP2	YPR166C	348 nt		4.25	□□□□□ -1.73
VPS41	P38959	SHE3	YBR130C	1278 nt		4.25	□□□□□ -1.73
VPS41	P38959	LDH1	YBR204C	1128 nt		4.25	□□□□□ -1.73
VPS41	P38959	Q0017	Q0017	162 nt		4.25	□□□□□ -1.73
VPS41	P38959	MCM7	YBR202W	2538 nt		4.25	□□□□□ -1.73
VPS41	P38959	YPR003C	YPR003C	2265 nt		4.24	□□□□□ -1.73
VPS41	P38959	YER076C	YER076C	909 nt		4.24	□□□□□ -1.73
VPS41	P38959	YFL012W	YFL012W	447 nt		4.24	□□□□□ -1.73
VPS41	P38959	ECM9	YKR004C	1134 nt		4.24	□□□□□ -1.73
VPS41	P38959	URA5	YML106W	681 nt		4.24	□□□□□ -1.73
VPS41	P38959	CCS1	YMR038C	750 nt		4.24	□□□□□ -1.73
VPS41	P38959	FYV6	YNL133C	522 nt		4.24	□□□□□ -1.73
VPS41	P38959	YBR056W-A	YBR056W-A	201 nt		4.24	□□□□□ -1.73
VPS41	P38959	PUF2	YPR042C	3228 nt		4.24	□□□□□ -1.73
VPS41	P38959	AIM21	YIR003W	2040 nt		4.23	□□□□□ -1.73
VPS41	P38959	KXD1	YGL079W	657 nt		4.23	□□□□□ -1.73
VPS41	P38959	ATG33	YLR356W	594 nt		4.23	□□□□□ -1.73
VPS41	P38959	ARA1	YBR149W	1035 nt		4.23	□□□□□ -1.73
VPS41	P38959	SPP381	YBR152W	876 nt		4.23	□□□□□ -1.73
VPS41	P38959	ALG11	YNL048W	1647 nt		4.23	□□□□□ -1.73
VPS41	P38959	YOR022C	YOR022C	2148 nt		4.22	□□□□□ -1.73
VPS41	P38959	PEP7	YDR323C	1548 nt		4.22	□□□□□ -1.73
VPS41	P38959	EMC1	YCL045C	2283 nt		4.22	□□□□□ -1.73
VPS41	P38959	RDI1	YDL135C	609 nt		4.22	□□□□□ -1.73
VPS41	P38959	YER034W	YER034W	558 nt		4.22	□□□□□ -1.73
VPS41	P38959	PEX21	YGR239C	867 nt		4.22	□□□□□ -1.73
VPS41	P38959	SPO11	YHL022C	1197 nt		4.22	□□□□□ -1.73
VPS41	P38959	RIF2	YLR453C	1188 nt		4.22	□□□□□ -1.73
VPS41	P38959	RUF5-1	RUF5-1	710 nt		4.22	□□□□□ -1.73
VPS41	P38959	RUF5-2	RUF5-2	710 nt		4.22	□□□□□ -1.73
VPS41	P38959	RTC1	YOL138C	4026 nt		4.22	□□□□□ -1.73
VPS41	P38959	YMR111C	YMR111C	1389 nt		4.22	□□□□□ -1.73
VPS41	P38959	SPT6	YGR116W	4356 nt		4.22	□□□□□ -1.73
VPS41	P38959	SPT16	YGL207W	3108 nt		4.21	□□□□□ -1.74
VPS41	P38959	NOP6	YDL213C	678 nt		4.21	□□□□□ -1.74
VPS41	P38959	YDR391C	YDR391C	699 nt		4.21	□□□□□ -1.74
VPS41	P38959	YEA4	YEL004W	1029 nt		4.21	□□□□□ -1.74
VPS41	P38959	FMP10	YER182W	735 nt		4.21	□□□□□ -1.74
VPS41	P38959	YFR057W	YFR057W	456 nt		4.21	□□□□□ -1.74
VPS41	P38959	YGL230C	YGL230C	444 nt		4.21	□□□□□ -1.74
VPS41	P38959	SOL3	YHR163W	750 nt		4.21	□□□□□ -1.74
VPS41	P38959	EST3	YIL009C-A	546 nt		4.21	□□□□□ -1.74
VPS41	P38959	RPC25	YKL144C	639 nt		4.21	□□□□□ -1.74
VPS41	P38959	PML39	YML107C	1005 nt		4.21	□□□□□ -1.74
VPS41	P38959	UFE1	YOR075W	1041 nt		4.21	□□□□□ -1.74
VPS41	P38959	VPS21	YOR089C	633 nt		4.21	□□□□□ -1.74
VPS41	P38959	PNO1	YOR145C	825 nt		4.21	□□□□□ -1.74
VPS41	P38959	CBP6	YBR120C	489 nt		4.21	□□□□□ -1.74
VPS41	P38959	GLO3	YER122C	1482 nt		4.21	□□□□□ -1.74
VPS41	P38959	YDR526C	YDR526C	471 nt		4.2	□□□□□ -1.74
VPS41	P38959	HTD2	YHR067W	843 nt		4.2	□□□□□ -1.74
VPS41	P38959	GTT1	YIR038C	705 nt		4.2	□□□□□ -1.74
VPS41	P38959	JLP1	YLL057C	1239 nt		4.2	□□□□□ -1.74
VPS41	P38959	ARG80	YMR042W	534 nt		4.2	□□□□□ -1.74
VPS41	P38959	YNL296W	YNL296W	315 nt		4.2	□□□□□ -1.74
VPS41	P38959	GRX5	YPL059W	453 nt		4.2	□□□□□ -1.74
VPS41	P38959	GCR1	YPL075W	2358 nt		4.2	□□□□□ -1.74
VPS41	P38959	COX2	Q0250	756 nt		4.19	□□□□□ -1.74
VPS41	P38959	SDS3	YIL084C	984 nt		4.19	□□□□□ -1.74
VPS41	P38959	EFB1	YAL003W	621 nt		4.19	□□□□□ -1.74
VPS41	P38959	YJR112W-A	YJR112W-A	330 nt		4.19	□□□□□ -1.74
VPS41	P38959	ECM15	YBL001C	315 nt		4.19	□□□□□ -1.74
VPS41	P38959	YML053C	YML053C	639 nt		4.19	□□□□□ -1.74
VPS41	P38959	YMR105W-A	YMR105W-A	195 nt		4.19	□□□□□ -1.74
VPS41	P38959	YBR016W	YBR016W	387 nt		4.19	□□□□□ -1.74
VPS41	P38959	IRC13	YOR235W	315 nt		4.19	□□□□□ -1.74
VPS41	P38959	YOR314W	YOR314W	330 nt		4.19	□□□□□ -1.74
VPS41	P38959	CHD1	YER164W	4407 nt		4.19	□□□□□ -1.74
VPS41	P38959	APL4	YPR029C	2499 nt		4.19	□□□□□ -1.74
VPS41	P38959	RIM4	YHL024W	2142 nt		4.19	□□□□□ -1.74
VPS41	P38959	RPO31	YOR116C	4383 nt		4.19	□□□□□ -1.74
VPS41	P38959	TYS1	YGR185C	1185 nt		4.18	□□□□□ -1.74
VPS41	P38959	PCL7	YIL050W	858 nt		4.18	□□□□□ -1.74
VPS41	P38959	FMP46	YKR049C	402 nt		4.18	□□□□□ -1.74
VPS41	P38959	BOS1	YLR078C	735 nt		4.18	□□□□□ -1.74
VPS41	P38959	ERD2	YBL040C	660 nt		4.18	□□□□□ -1.74
VPS41	P38959	IDH2	YOR136W	1110 nt		4.18	□□□□□ -1.74
VPS41	P38959	TRE2	YOR256C	2430 nt		4.18	□□□□□ -1.74
VPS41	P38959	SPO1	YNL012W	1896 nt		4.18	□□□□□ -1.74
VPS41	P38959	PHM7	YOL084W	2976 nt		4.17	□□□□□ -1.74
VPS41	P38959	USB1	YLR132C	873 nt		4.17	□□□□□ -1.74
VPS41	P38959	GSP1	YLR293C	660 nt		4.17	□□□□□ -1.74

Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms