Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD40P25942 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.72■□□□□ 0.59
CD40P25942 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD40P25942 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD40P25942 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD40P25942 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD40P25942 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD40P25942 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CD40P25942 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD40P25942 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CD40P25942 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD40P25942 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.71■□□□□ 0.59
CD40P25942 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CD40P25942 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.71■□□□□ 0.59
CD40P25942 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CD40P25942 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.71■□□□□ 0.59
CD40P25942 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD40P25942 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD40P25942 DUSP8P5-201ENST00000422884 1815 ntBASIC18.71■□□□□ 0.59
CD40P25942 AC009237.3-201ENST00000393279 1427 ntBASIC18.71■□□□□ 0.59
CD40P25942 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD40P25942 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD40P25942 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CD40P25942 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.7■□□□□ 0.58
CD40P25942 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CD40P25942 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.7■□□□□ 0.58
CD40P25942 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CD40P25942 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.7■□□□□ 0.58
CD40P25942 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.7■□□□□ 0.58
CD40P25942 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CD40P25942 IKBKGP1-201ENST00000612193 1073 ntBASIC18.7■□□□□ 0.58
CD40P25942 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.7■□□□□ 0.58
CD40P25942 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CD40P25942 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD40P25942 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD40P25942 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CD40P25942 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.69■□□□□ 0.58
CD40P25942 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD40P25942 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.69■□□□□ 0.58
CD40P25942 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.69■□□□□ 0.58
CD40P25942 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.69■□□□□ 0.58
CD40P25942 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.69■□□□□ 0.58
CD40P25942 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.69■□□□□ 0.58
CD40P25942 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.69■□□□□ 0.58
CD40P25942 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.69■□□□□ 0.58
CD40P25942 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD40P25942 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD40P25942 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CD40P25942 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD40P25942 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD40P25942 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.68■□□□□ 0.58
CD40P25942 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.68■□□□□ 0.58
CD40P25942 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.68■□□□□ 0.58
CD40P25942 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.68■□□□□ 0.58
CD40P25942 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.68■□□□□ 0.58
CD40P25942 AL137784.2-201ENST00000607332 1000 ntBASIC18.68■□□□□ 0.58
CD40P25942 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.68■□□□□ 0.58
CD40P25942 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CD40P25942 AC005224.4-201ENST00000583262 1652 ntBASIC18.68■□□□□ 0.58
CD40P25942 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.68■□□□□ 0.58
CD40P25942 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CD40P25942 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.68■□□□□ 0.58
CD40P25942 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD40P25942 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.68■□□□□ 0.58
CD40P25942 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CD40P25942 OR7E47P-201ENST00000546390 1422 ntBASIC18.67■□□□□ 0.58
CD40P25942 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD40P25942 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.67■□□□□ 0.58
CD40P25942 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD40P25942 AC079140.4-201ENST00000507448 529 ntBASIC18.67■□□□□ 0.58
CD40P25942 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.67■□□□□ 0.58
CD40P25942 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.67■□□□□ 0.58
CD40P25942 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD40P25942 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD40P25942 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD40P25942 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD40P25942 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD40P25942 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CD40P25942 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CD40P25942 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms