Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
COL11A2P13942 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.96■■□□□ 1.91
COL11A2P13942 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.96■■□□□ 1.91
COL11A2P13942 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL11A2P13942 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.95■■□□□ 1.91
COL11A2P13942 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
COL11A2P13942 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
COL11A2P13942 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
COL11A2P13942 AC098590.1-201ENST00000468126 897 ntBASIC26.95■■□□□ 1.9
COL11A2P13942 AC010536.3-201ENST00000620306 533 ntBASIC26.95■■□□□ 1.9
COL11A2P13942 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.95■■□□□ 1.9
COL11A2P13942 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.95■■□□□ 1.9
COL11A2P13942 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
COL11A2P13942 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
COL11A2P13942 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.94■■□□□ 1.9
COL11A2P13942 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.94■■□□□ 1.9
COL11A2P13942 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL11A2P13942 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.94■■□□□ 1.9
COL11A2P13942 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL11A2P13942 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
COL11A2P13942 AC133552.2-202ENST00000575694 574 ntBASIC26.94■■□□□ 1.9
COL11A2P13942 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL11A2P13942 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.93■■□□□ 1.9
COL11A2P13942 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL11A2P13942 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
COL11A2P13942 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.93■■□□□ 1.9
COL11A2P13942 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL11A2P13942 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL11A2P13942 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL11A2P13942 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.93■■□□□ 1.9
COL11A2P13942 POU5F1P3-201ENST00000428824 1078 ntBASIC26.93■■□□□ 1.9
COL11A2P13942 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.93■■□□□ 1.9
COL11A2P13942 ITM2C-210ENST00000620962 501 ntBASIC26.93■■□□□ 1.9
COL11A2P13942 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.93■■□□□ 1.9
COL11A2P13942 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
COL11A2P13942 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
COL11A2P13942 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
COL11A2P13942 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
COL11A2P13942 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.92■■□□□ 1.9
COL11A2P13942 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL11A2P13942 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.92■■□□□ 1.9
COL11A2P13942 AP001160.3-201ENST00000601484 763 ntBASIC26.92■■□□□ 1.9
COL11A2P13942 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
COL11A2P13942 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.92■■□□□ 1.9
COL11A2P13942 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL11A2P13942 AC055733.4-201ENST00000638462 1354 ntBASIC26.91■■□□□ 1.9
COL11A2P13942 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
COL11A2P13942 SLC7A5P1-201ENST00000568957 537 ntBASIC26.91■■□□□ 1.9
COL11A2P13942 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
COL11A2P13942 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.91■■□□□ 1.9
COL11A2P13942 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL11A2P13942 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL11A2P13942 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.9■■□□□ 1.9
COL11A2P13942 RPS2P52-201ENST00000469610 820 ntBASIC26.9■■□□□ 1.9
COL11A2P13942 RNA5SP413-201ENST00000516373 109 ntBASIC26.9■■□□□ 1.9
COL11A2P13942 AC105036.2-201ENST00000569468 176 ntBASIC26.9■■□□□ 1.9
COL11A2P13942 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
COL11A2P13942 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL11A2P13942 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
COL11A2P13942 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.89■■□□□ 1.9
COL11A2P13942 FAM201B-201ENST00000458407 597 ntBASIC26.89■■□□□ 1.9
COL11A2P13942 AC138907.5-202ENST00000569484 235 ntBASIC26.89■■□□□ 1.9
COL11A2P13942 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
COL11A2P13942 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
COL11A2P13942 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.88■■□□□ 1.89
COL11A2P13942 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 AC013268.1-206ENST00000638368 961 ntBASIC26.88■■□□□ 1.89
COL11A2P13942 AC112229.1-201ENST00000639295 961 ntBASIC26.88■■□□□ 1.89
COL11A2P13942 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL11A2P13942 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL11A2P13942 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.87■■□□□ 1.89
COL11A2P13942 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.87■■□□□ 1.89
COL11A2P13942 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
COL11A2P13942 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
COL11A2P13942 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.87■■□□□ 1.89
COL11A2P13942 AC004812.2-201ENST00000611079 2094 ntBASIC26.87■■□□□ 1.89
COL11A2P13942 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.87■■□□□ 1.89
COL11A2P13942 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
COL11A2P13942 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL11A2P13942 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.87■■□□□ 1.89
COL11A2P13942 AC083880.1-201ENST00000608266 535 ntBASIC26.87■■□□□ 1.89
COL11A2P13942 AC133041.1-202ENST00000642053 222 ntBASIC26.87■■□□□ 1.89
COL11A2P13942 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL11A2P13942 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.86■■□□□ 1.89
COL11A2P13942 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL11A2P13942 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL11A2P13942 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL11A2P13942 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL11A2P13942 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL11A2P13942 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.86■■□□□ 1.89
COL11A2P13942 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL11A2P13942 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL11A2P13942 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms