Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 AC008764.7-201ENST00000593779 1081 ntBASIC23.59■■□□□ 1.37
TRIM49CP0CI26 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM49CP0CI26 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
TRIM49CP0CI26 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM49CP0CI26 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
TRIM49CP0CI26 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM49CP0CI26 AC079089.2-201ENST00000531211 1277 ntBASIC23.58■■□□□ 1.37
TRIM49CP0CI26 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.58■■□□□ 1.37
TRIM49CP0CI26 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM49CP0CI26 AC233992.3-201ENST00000607491 485 ntBASIC23.58■■□□□ 1.37
TRIM49CP0CI26 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TRIM49CP0CI26 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM49CP0CI26 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 AP001330.3-201ENST00000520123 633 ntBASIC23.57■■□□□ 1.36
TRIM49CP0CI26 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 AL139246.5-201ENST00000606645 996 ntBASIC23.57■■□□□ 1.36
TRIM49CP0CI26 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49CP0CI26 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 AP005435.1-201ENST00000529293 1178 ntBASIC23.56■■□□□ 1.36
TRIM49CP0CI26 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 AL031432.3-201ENST00000607698 485 ntBASIC23.56■■□□□ 1.36
TRIM49CP0CI26 AC087239.1-201ENST00000622671 572 ntBASIC23.56■■□□□ 1.36
TRIM49CP0CI26 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49CP0CI26 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 AC099791.1-201ENST00000416440 715 ntBASIC23.55■■□□□ 1.36
TRIM49CP0CI26 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49CP0CI26 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM49CP0CI26 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49CP0CI26 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM49CP0CI26 AF213884.3-201ENST00000563833 479 ntBASIC23.54■■□□□ 1.36
TRIM49CP0CI26 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM49CP0CI26 AC126544.1-201ENST00000580842 1059 ntBASIC23.54■■□□□ 1.36
TRIM49CP0CI26 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.54■■□□□ 1.36
TRIM49CP0CI26 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM49CP0CI26 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49CP0CI26 C11orf96-202ENST00000528572 1834 ntBASIC23.54■■□□□ 1.36
TRIM49CP0CI26 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49CP0CI26 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM49CP0CI26 EDA-201ENST00000338901 1233 ntBASIC23.53■■□□□ 1.36
TRIM49CP0CI26 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49CP0CI26 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49CP0CI26 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49CP0CI26 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49CP0CI26 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49CP0CI26 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49CP0CI26 OXCT2P1-201ENST00000447263 1535 ntBASIC23.53■■□□□ 1.36
TRIM49CP0CI26 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
TRIM49CP0CI26 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49CP0CI26 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms