Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 AC080038.3-201ENST00000623346 1952 ntBASIC20.85■□□□□ 0.93
LINGO3P0C6S8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 FAM99A-202ENST00000538190 1989 ntBASIC20.84■□□□□ 0.93
LINGO3P0C6S8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
LINGO3P0C6S8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.83■□□□□ 0.93
LINGO3P0C6S8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINGO3P0C6S8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.83■□□□□ 0.93
LINGO3P0C6S8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LINGO3P0C6S8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINGO3P0C6S8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
LINGO3P0C6S8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINGO3P0C6S8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINGO3P0C6S8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LINGO3P0C6S8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINGO3P0C6S8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LINGO3P0C6S8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINGO3P0C6S8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.8■□□□□ 0.92
LINGO3P0C6S8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINGO3P0C6S8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINGO3P0C6S8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINGO3P0C6S8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINGO3P0C6S8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LINGO3P0C6S8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
LINGO3P0C6S8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 GUSBP5-201ENST00000418136 578 ntBASIC20.79■□□□□ 0.92
LINGO3P0C6S8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINGO3P0C6S8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms