Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FREM3P0C091 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FREM3P0C091 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FREM3P0C091 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FREM3P0C091 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FREM3P0C091 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
FREM3P0C091 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FREM3P0C091 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.74■□□□□ 0.75
FREM3P0C091 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.73■□□□□ 0.75
FREM3P0C091 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.73■□□□□ 0.75
FREM3P0C091 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.73■□□□□ 0.75
FREM3P0C091 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.73■□□□□ 0.75
FREM3P0C091 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.73■□□□□ 0.75
FREM3P0C091 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
FREM3P0C091 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.73■□□□□ 0.75
FREM3P0C091 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.73■□□□□ 0.75
FREM3P0C091 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 KRT18P5-201ENST00000436075 1291 ntBASIC19.73■□□□□ 0.75
FREM3P0C091 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.73■□□□□ 0.75
FREM3P0C091 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM3P0C091 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM3P0C091 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.72■□□□□ 0.75
FREM3P0C091 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FREM3P0C091 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM3P0C091 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM3P0C091 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.72■□□□□ 0.75
FREM3P0C091 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.72■□□□□ 0.75
FREM3P0C091 AL117328.2-201ENST00000624617 1940 ntBASIC19.72■□□□□ 0.75
FREM3P0C091 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM3P0C091 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.72■□□□□ 0.75
FREM3P0C091 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM3P0C091 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
FREM3P0C091 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM3P0C091 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FREM3P0C091 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM3P0C091 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.71■□□□□ 0.75
FREM3P0C091 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM3P0C091 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FREM3P0C091 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FREM3P0C091 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.71■□□□□ 0.75
FREM3P0C091 EP400NL-214ENST00000641289 2402 ntBASIC19.71■□□□□ 0.75
FREM3P0C091 TERF1P2-201ENST00000583350 1212 ntBASIC19.71■□□□□ 0.75
FREM3P0C091 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FREM3P0C091 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FREM3P0C091 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM3P0C091 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM3P0C091 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.7■□□□□ 0.74
FREM3P0C091 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM3P0C091 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM3P0C091 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FREM3P0C091 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
FREM3P0C091 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.7■□□□□ 0.74
FREM3P0C091 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
FREM3P0C091 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
FREM3P0C091 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.7■□□□□ 0.74
FREM3P0C091 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.7■□□□□ 0.74
FREM3P0C091 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM3P0C091 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
FREM3P0C091 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
FREM3P0C091 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.69■□□□□ 0.74
FREM3P0C091 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FREM3P0C091 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
FREM3P0C091 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
FREM3P0C091 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FREM3P0C091 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FREM3P0C091 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
FREM3P0C091 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.69■□□□□ 0.74
FREM3P0C091 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FREM3P0C091 BX005040.4-201ENST00000637145 1518 ntBASIC19.68■□□□□ 0.74
FREM3P0C091 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
FREM3P0C091 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM3P0C091 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.68■□□□□ 0.74
FREM3P0C091 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FREM3P0C091 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM3P0C091 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM3P0C091 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.68■□□□□ 0.74
FREM3P0C091 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM3P0C091 YBX1P1-201ENST00000445822 960 ntBASIC19.68■□□□□ 0.74
FREM3P0C091 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.68■□□□□ 0.74
FREM3P0C091 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FREM3P0C091 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM3P0C091 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FREM3P0C091 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FREM3P0C091 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms