Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.69■■□□□ 1.06
SNRPAP09012 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SNRPAP09012 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.69■■□□□ 1.06
SNRPAP09012 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.69■■□□□ 1.06
SNRPAP09012 KRT125P-201ENST00000546827 989 ntBASIC21.69■■□□□ 1.06
SNRPAP09012 AL499627.2-201ENST00000606283 725 ntBASIC21.69■■□□□ 1.06
SNRPAP09012 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.69■■□□□ 1.06
SNRPAP09012 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SNRPAP09012 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
SNRPAP09012 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SNRPAP09012 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPAP09012 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.69■■□□□ 1.06
SNRPAP09012 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.69■■□□□ 1.06
SNRPAP09012 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SNRPAP09012 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.68■■□□□ 1.06
SNRPAP09012 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.68■■□□□ 1.06
SNRPAP09012 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SNRPAP09012 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPAP09012 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPAP09012 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPAP09012 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPAP09012 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPAP09012 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.67■■□□□ 1.06
SNRPAP09012 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPAP09012 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.67■■□□□ 1.06
SNRPAP09012 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPAP09012 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.67■■□□□ 1.06
SNRPAP09012 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPAP09012 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPAP09012 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPAP09012 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPAP09012 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SNRPAP09012 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SNRPAP09012 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.66■■□□□ 1.06
SNRPAP09012 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SNRPAP09012 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPAP09012 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPAP09012 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SNRPAP09012 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SNRPAP09012 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPAP09012 Z92544.1-202ENST00000571933 1220 ntBASIC21.66■■□□□ 1.06
SNRPAP09012 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.66■■□□□ 1.06
SNRPAP09012 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPAP09012 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPAP09012 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPAP09012 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.66■■□□□ 1.06
SNRPAP09012 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPAP09012 Z98882.1-201ENST00000622160 2253 ntBASIC21.66■■□□□ 1.06
SNRPAP09012 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRPAP09012 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRPAP09012 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRPAP09012 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNRPAP09012 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SNRPAP09012 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRPAP09012 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.65■■□□□ 1.06
SNRPAP09012 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRPAP09012 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRPAP09012 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.65■■□□□ 1.06
SNRPAP09012 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SNRPAP09012 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNRPAP09012 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SNRPAP09012 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNRPAP09012 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SNRPAP09012 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
SNRPAP09012 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.64■■□□□ 1.05
SNRPAP09012 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.64■■□□□ 1.05
SNRPAP09012 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRPAP09012 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SNRPAP09012 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.64■■□□□ 1.05
SNRPAP09012 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRPAP09012 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRPAP09012 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRPAP09012 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNRPAP09012 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRPAP09012 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRPAP09012 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRPAP09012 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.63■■□□□ 1.05
SNRPAP09012 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRPAP09012 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.63■■□□□ 1.05
SNRPAP09012 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.63■■□□□ 1.05
SNRPAP09012 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNRPAP09012 MIR4787-201ENST00000607364 84 ntBASIC21.63■■□□□ 1.05
SNRPAP09012 AC010997.5-201ENST00000609182 354 ntBASIC21.63■■□□□ 1.05
SNRPAP09012 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.63■■□□□ 1.05
SNRPAP09012 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.63■■□□□ 1.05
SNRPAP09012 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNRPAP09012 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRPAP09012 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SNRPAP09012 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNRPAP09012 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms