Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC022211.4-201ENST00000625094 2161 ntBASIC13.75□□□□□ -0.21
APOBP04114 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOBP04114 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.74□□□□□ -0.21
APOBP04114 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
APOBP04114 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
APOBP04114 AC055733.4-201ENST00000638462 1354 ntBASIC13.74□□□□□ -0.21
APOBP04114 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC13.74□□□□□ -0.21
APOBP04114 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.74□□□□□ -0.21
APOBP04114 MYCNOS-205ENST00000641950 531 ntBASIC13.74□□□□□ -0.21
APOBP04114 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
APOBP04114 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBP04114 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.74□□□□□ -0.21
APOBP04114 AP001160.3-201ENST00000601484 763 ntBASIC13.74□□□□□ -0.21
APOBP04114 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBP04114 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOBP04114 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBP04114 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.73□□□□□ -0.21
APOBP04114 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBP04114 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBP04114 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBP04114 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.73□□□□□ -0.21
APOBP04114 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBP04114 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.73□□□□□ -0.21
APOBP04114 AC009237.3-201ENST00000393279 1427 ntBASIC13.73□□□□□ -0.21
APOBP04114 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.73□□□□□ -0.21
APOBP04114 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBP04114 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
APOBP04114 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBP04114 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBP04114 LINC01529-204ENST00000636474 1715 ntBASIC13.72□□□□□ -0.21
APOBP04114 UNC93B4-201ENST00000505679 747 ntBASIC13.72□□□□□ -0.21
APOBP04114 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBP04114 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBP04114 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBP04114 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBP04114 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBP04114 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBP04114 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBP04114 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOBP04114 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBP04114 RNA5SP413-201ENST00000516373 109 ntBASIC13.72□□□□□ -0.21
APOBP04114 AC010536.3-201ENST00000620306 533 ntBASIC13.72□□□□□ -0.21
APOBP04114 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBP04114 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBP04114 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBP04114 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBP04114 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBP04114 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.71□□□□□ -0.21
APOBP04114 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBP04114 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
APOBP04114 FAM210CP-201ENST00000445714 574 ntBASIC13.71□□□□□ -0.21
APOBP04114 TERF1P5-201ENST00000477545 1207 ntBASIC13.71□□□□□ -0.21
APOBP04114 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
APOBP04114 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBP04114 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBP04114 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBP04114 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBP04114 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
APOBP04114 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBP04114 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBP04114 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBP04114 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBP04114 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBP04114 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOBP04114 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBP04114 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.71□□□□□ -0.22
APOBP04114 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.71□□□□□ -0.22
APOBP04114 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.7□□□□□ -0.22
APOBP04114 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOBP04114 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBP04114 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOBP04114 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBP04114 AC006058.3-201ENST00000606217 1069 ntBASIC13.7□□□□□ -0.22
APOBP04114 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBP04114 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBP04114 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBP04114 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBP04114 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBP04114 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.7□□□□□ -0.22
APOBP04114 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBP04114 DUSP8P3-201ENST00000399571 1760 ntBASIC13.7□□□□□ -0.22
APOBP04114 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
APOBP04114 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
APOBP04114 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.69□□□□□ -0.22
APOBP04114 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.69□□□□□ -0.22
APOBP04114 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.69□□□□□ -0.22
APOBP04114 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 H19-210ENST00000439725 1929 ntTSL 2 BASIC13.69□□□□□ -0.22
APOBP04114 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOBP04114 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
APOBP04114 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms