Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 AC241377.3-202ENST00000626088 1088 ntBASIC19.16■□□□□ 0.66
ZNF254O75437 AC241585.3-202ENST00000628937 1088 ntBASIC19.16■□□□□ 0.66
ZNF254O75437 AC245100.8-202ENST00000629247 1058 ntBASIC19.16■□□□□ 0.66
ZNF254O75437 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ZNF254O75437 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF254O75437 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF254O75437 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF254O75437 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
ZNF254O75437 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF254O75437 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF254O75437 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.15■□□□□ 0.66
ZNF254O75437 AL117332.1-201ENST00000622628 974 ntBASIC19.15■□□□□ 0.66
ZNF254O75437 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF254O75437 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF254O75437 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF254O75437 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF254O75437 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF254O75437 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF254O75437 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF254O75437 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.14■□□□□ 0.66
ZNF254O75437 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF254O75437 FAM99A-202ENST00000538190 1989 ntBASIC19.14■□□□□ 0.65
ZNF254O75437 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF254O75437 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
ZNF254O75437 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
ZNF254O75437 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF254O75437 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZNF254O75437 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ZNF254O75437 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 AC026310.3-201ENST00000625186 2373 ntBASIC19.13■□□□□ 0.65
ZNF254O75437 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF254O75437 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF254O75437 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
ZNF254O75437 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF254O75437 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ZNF254O75437 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF254O75437 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ZNF254O75437 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF254O75437 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF254O75437 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF254O75437 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF254O75437 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ZNF254O75437 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF254O75437 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ZNF254O75437 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF254O75437 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ZNF254O75437 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ZNF254O75437 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF254O75437 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF254O75437 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF254O75437 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF254O75437 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF254O75437 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF254O75437 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF254O75437 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF254O75437 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF254O75437 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ZNF254O75437 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF254O75437 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF254O75437 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF254O75437 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF254O75437 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF254O75437 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF254O75437 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF254O75437 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF254O75437 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF254O75437 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.1■□□□□ 0.65
ZNF254O75437 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
ZNF254O75437 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.1■□□□□ 0.65
ZNF254O75437 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF254O75437 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF254O75437 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF254O75437 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZNF254O75437 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF254O75437 AL451085.2-201ENST00000605085 799 ntBASIC19.1■□□□□ 0.65
ZNF254O75437 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF254O75437 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF254O75437 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF254O75437 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms