Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 AL031432.3-201ENST00000607698 485 ntBASIC19.34■□□□□ 0.69
TRAF3IP2O43734 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP2O43734 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAF3IP2O43734 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP2O43734 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TRAF3IP2O43734 AC027682.1-201ENST00000562846 899 ntBASIC19.33■□□□□ 0.68
TRAF3IP2O43734 OXCT2P1-201ENST00000447263 1535 ntBASIC19.33■□□□□ 0.68
TRAF3IP2O43734 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP2O43734 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAF3IP2O43734 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP2O43734 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP2O43734 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP2O43734 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP2O43734 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 AC008764.7-201ENST00000593779 1081 ntBASIC19.32■□□□□ 0.68
TRAF3IP2O43734 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 AL355001.2-201ENST00000620617 1191 ntBASIC19.32■□□□□ 0.68
TRAF3IP2O43734 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP2O43734 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 MIR939-201ENST00000401314 82 ntBASIC19.31■□□□□ 0.68
TRAF3IP2O43734 AC099791.1-201ENST00000416440 715 ntBASIC19.31■□□□□ 0.68
TRAF3IP2O43734 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 AF213884.3-201ENST00000563833 479 ntBASIC19.31■□□□□ 0.68
TRAF3IP2O43734 AC133561.4-201ENST00000566112 224 ntBASIC19.31■□□□□ 0.68
TRAF3IP2O43734 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP2O43734 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 AC126544.1-201ENST00000580842 1059 ntBASIC19.3■□□□□ 0.68
TRAF3IP2O43734 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP2O43734 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 IGHV3-19-201ENST00000521488 291 ntBASIC19.29■□□□□ 0.68
TRAF3IP2O43734 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP2O43734 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 OR7E47P-201ENST00000546390 1422 ntBASIC19.28■□□□□ 0.68
TRAF3IP2O43734 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRAF3IP2O43734 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms