Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PROM1O43490 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.57■□□□□ 0.88
PROM1O43490 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.57■□□□□ 0.88
PROM1O43490 AL355001.2-201ENST00000620617 1191 ntBASIC20.57■□□□□ 0.88
PROM1O43490 AC087239.1-201ENST00000622671 572 ntBASIC20.57■□□□□ 0.88
PROM1O43490 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
PROM1O43490 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PROM1O43490 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PROM1O43490 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.57■□□□□ 0.88
PROM1O43490 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PROM1O43490 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
PROM1O43490 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PROM1O43490 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.56■□□□□ 0.88
PROM1O43490 AC079089.2-201ENST00000531211 1277 ntBASIC20.56■□□□□ 0.88
PROM1O43490 AC008764.7-201ENST00000593779 1081 ntBASIC20.56■□□□□ 0.88
PROM1O43490 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.56■□□□□ 0.88
PROM1O43490 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.56■□□□□ 0.88
PROM1O43490 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM1O43490 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PROM1O43490 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PROM1O43490 EP400NL-214ENST00000641289 2402 ntBASIC20.55■□□□□ 0.88
PROM1O43490 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM1O43490 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PROM1O43490 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.55■□□□□ 0.88
PROM1O43490 AL031432.3-201ENST00000607698 485 ntBASIC20.55■□□□□ 0.88
PROM1O43490 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM1O43490 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM1O43490 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM1O43490 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PROM1O43490 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM1O43490 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PROM1O43490 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.54■□□□□ 0.88
PROM1O43490 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PROM1O43490 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.54■□□□□ 0.88
PROM1O43490 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PROM1O43490 LINC00526-201ENST00000581067 1875 ntBASIC20.54■□□□□ 0.88
PROM1O43490 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PROM1O43490 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
PROM1O43490 AP001330.3-201ENST00000520123 633 ntBASIC20.54■□□□□ 0.88
PROM1O43490 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.54■□□□□ 0.88
PROM1O43490 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PROM1O43490 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PROM1O43490 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PROM1O43490 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.53■□□□□ 0.88
PROM1O43490 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PROM1O43490 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 AC027682.1-201ENST00000562846 899 ntBASIC20.53■□□□□ 0.88
PROM1O43490 AC126544.1-201ENST00000580842 1059 ntBASIC20.53■□□□□ 0.88
PROM1O43490 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.53■□□□□ 0.88
PROM1O43490 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.53■□□□□ 0.88
PROM1O43490 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
PROM1O43490 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.53■□□□□ 0.88
PROM1O43490 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PROM1O43490 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.53■□□□□ 0.88
PROM1O43490 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PROM1O43490 OXCT2P1-201ENST00000447263 1535 ntBASIC20.53■□□□□ 0.88
PROM1O43490 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PROM1O43490 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
PROM1O43490 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PROM1O43490 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PROM1O43490 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PROM1O43490 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.52■□□□□ 0.88
PROM1O43490 AC099791.1-201ENST00000416440 715 ntBASIC20.52■□□□□ 0.88
PROM1O43490 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.52■□□□□ 0.88
PROM1O43490 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.52■□□□□ 0.88
PROM1O43490 AL136967.2-201ENST00000623968 743 ntBASIC20.52■□□□□ 0.88
PROM1O43490 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.52■□□□□ 0.88
PROM1O43490 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PROM1O43490 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PROM1O43490 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PROM1O43490 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PROM1O43490 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM1O43490 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PROM1O43490 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PROM1O43490 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM1O43490 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM1O43490 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PROM1O43490 AC092053.2-201ENST00000640557 1818 ntBASIC20.51■□□□□ 0.87
PROM1O43490 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PROM1O43490 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.51■□□□□ 0.87
PROM1O43490 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms