Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC35.84■■■■□ 3.33
CHD1O14646 OR10C1-204ENST00000622521 1039 ntBASIC35.84■■■■□ 3.33
CHD1O14646 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC35.84■■■■□ 3.33
CHD1O14646 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC35.84■■■■□ 3.33
CHD1O14646 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
CHD1O14646 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
CHD1O14646 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC35.83■■■■□ 3.33
CHD1O14646 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CHD1O14646 PLLP-204ENST00000569059 665 ntTSL 3 BASIC35.83■■■■□ 3.33
CHD1O14646 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
CHD1O14646 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
CHD1O14646 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
CHD1O14646 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC35.82■■■■□ 3.32
CHD1O14646 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC35.82■■■■□ 3.32
CHD1O14646 AC138907.5-202ENST00000569484 235 ntBASIC35.82■■■■□ 3.32
CHD1O14646 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC35.82■■■■□ 3.32
CHD1O14646 EI24-213ENST00000618552 1747 ntTSL 5 BASIC35.82■■■■□ 3.32
CHD1O14646 AC009237.3-201ENST00000393279 1427 ntBASIC35.81■■■■□ 3.32
CHD1O14646 BMP1-204ENST00000397814 836 ntTSL 4 BASIC35.81■■■■□ 3.32
CHD1O14646 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC35.81■■■■□ 3.32
CHD1O14646 UNC93B5-201ENST00000530315 699 ntBASIC35.81■■■■□ 3.32
CHD1O14646 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC35.81■■■■□ 3.32
CHD1O14646 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC35.81■■■■□ 3.32
CHD1O14646 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
CHD1O14646 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC35.81■■■■□ 3.32
CHD1O14646 MME-217ENST00000616757 1315 ntTSL 5 BASIC35.8■■■■□ 3.32
CHD1O14646 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC35.8■■■■□ 3.32
CHD1O14646 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
CHD1O14646 FAM210CP-201ENST00000445714 574 ntBASIC35.8■■■■□ 3.32
CHD1O14646 AP003097.1-201ENST00000530657 1135 ntBASIC35.8■■■■□ 3.32
CHD1O14646 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC35.8■■■■□ 3.32
CHD1O14646 AC091874.3-201ENST00000512672 1195 ntBASIC35.8■■■■□ 3.32
CHD1O14646 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC35.8■■■■□ 3.32
CHD1O14646 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC35.8■■■■□ 3.32
CHD1O14646 PXK-203ENST00000383715 1756 ntTSL 5 BASIC35.79■■■■□ 3.32
CHD1O14646 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
CHD1O14646 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC35.79■■■■□ 3.32
CHD1O14646 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC35.79■■■■□ 3.32
CHD1O14646 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC35.79■■■■□ 3.32
CHD1O14646 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC35.79■■■■□ 3.32
CHD1O14646 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CHD1O14646 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC35.78■■■■□ 3.32
CHD1O14646 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC35.78■■■■□ 3.32
CHD1O14646 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC35.78■■■■□ 3.32
CHD1O14646 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CHD1O14646 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CHD1O14646 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC35.78■■■■□ 3.32
CHD1O14646 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC35.77■■■■□ 3.32
CHD1O14646 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
CHD1O14646 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC35.77■■■■□ 3.32
CHD1O14646 AL359736.2-201ENST00000621992 437 ntBASIC35.77■■■■□ 3.32
CHD1O14646 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC35.77■■■■□ 3.32
CHD1O14646 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC35.77■■■■□ 3.32
CHD1O14646 TMEM202-AS1-202ENST00000565181 2325 ntBASIC35.77■■■■□ 3.32
CHD1O14646 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
CHD1O14646 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
CHD1O14646 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
CHD1O14646 PEX7-202ENST00000367756 680 ntTSL 3 BASIC35.76■■■■□ 3.31
CHD1O14646 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC35.76■■■■□ 3.31
CHD1O14646 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC35.76■■■■□ 3.31
CHD1O14646 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
CHD1O14646 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
CHD1O14646 AC073648.6-201ENST00000641589 218 ntBASIC35.76■■■■□ 3.31
CHD1O14646 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC35.75■■■■□ 3.31
CHD1O14646 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CHD1O14646 AC026366.1-201ENST00000488803 879 ntBASIC35.75■■■■□ 3.31
CHD1O14646 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC35.75■■■■□ 3.31
CHD1O14646 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC35.75■■■■□ 3.31
CHD1O14646 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CHD1O14646 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC35.75■■■■□ 3.31
CHD1O14646 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
CHD1O14646 GXYLT1P3-201ENST00000453058 1193 ntBASIC35.74■■■■□ 3.31
CHD1O14646 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
CHD1O14646 MIR4497-201ENST00000583208 89 ntBASIC35.74■■■■□ 3.31
CHD1O14646 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CHD1O14646 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC35.74■■■■□ 3.31
CHD1O14646 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC35.74■■■■□ 3.31
CHD1O14646 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC35.73■■■■□ 3.31
CHD1O14646 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
CHD1O14646 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CHD1O14646 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC35.73■■■■□ 3.31
CHD1O14646 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CHD1O14646 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
CHD1O14646 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC35.73■■■■□ 3.31
CHD1O14646 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CHD1O14646 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CHD1O14646 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC35.72■■■■□ 3.31
CHD1O14646 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CHD1O14646 OXCT2P1-201ENST00000447263 1535 ntBASIC35.72■■■■□ 3.31
CHD1O14646 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC35.72■■■■□ 3.31
CHD1O14646 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC35.72■■■■□ 3.31
CHD1O14646 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC35.71■■■■□ 3.31
CHD1O14646 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC35.71■■■■□ 3.31
CHD1O14646 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC35.71■■■■□ 3.31
CHD1O14646 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC35.71■■■■□ 3.31
CHD1O14646 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
CHD1O14646 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC35.71■■■■□ 3.31
CHD1O14646 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CHD1O14646 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CHD1O14646 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC35.71■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms