Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
AP3D1O14617 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
AP3D1O14617 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.18■□□□□ 0.82
AP3D1O14617 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
AP3D1O14617 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
AP3D1O14617 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.18■□□□□ 0.82
AP3D1O14617 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.18■□□□□ 0.82
AP3D1O14617 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.18■□□□□ 0.82
AP3D1O14617 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3D1O14617 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
AP3D1O14617 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.17■□□□□ 0.82
AP3D1O14617 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
AP3D1O14617 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.17■□□□□ 0.82
AP3D1O14617 AC099791.2-201ENST00000605725 427 ntBASIC20.17■□□□□ 0.82
AP3D1O14617 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.17■□□□□ 0.82
AP3D1O14617 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
AP3D1O14617 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
AP3D1O14617 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.17■□□□□ 0.82
AP3D1O14617 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.17■□□□□ 0.82
AP3D1O14617 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.17■□□□□ 0.82
AP3D1O14617 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP3D1O14617 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
AP3D1O14617 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3D1O14617 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
AP3D1O14617 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3D1O14617 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3D1O14617 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
AP3D1O14617 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
AP3D1O14617 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3D1O14617 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.16■□□□□ 0.82
AP3D1O14617 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.16■□□□□ 0.82
AP3D1O14617 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.16■□□□□ 0.82
AP3D1O14617 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.16■□□□□ 0.82
AP3D1O14617 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.16■□□□□ 0.82
AP3D1O14617 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3D1O14617 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
AP3D1O14617 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.16■□□□□ 0.82
AP3D1O14617 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3D1O14617 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3D1O14617 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP3D1O14617 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.15■□□□□ 0.82
AP3D1O14617 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP3D1O14617 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.15■□□□□ 0.82
AP3D1O14617 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP3D1O14617 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.15■□□□□ 0.82
AP3D1O14617 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP3D1O14617 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP3D1O14617 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP3D1O14617 AL499627.2-201ENST00000606283 725 ntBASIC20.15■□□□□ 0.82
AP3D1O14617 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.15■□□□□ 0.82
AP3D1O14617 AC241377.3-202ENST00000626088 1088 ntBASIC20.15■□□□□ 0.82
AP3D1O14617 AC241585.3-202ENST00000628937 1088 ntBASIC20.15■□□□□ 0.82
AP3D1O14617 AC245100.8-202ENST00000629247 1058 ntBASIC20.15■□□□□ 0.82
AP3D1O14617 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.15■□□□□ 0.82
AP3D1O14617 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.15■□□□□ 0.82
AP3D1O14617 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP3D1O14617 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.14■□□□□ 0.81
AP3D1O14617 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.14■□□□□ 0.81
AP3D1O14617 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.14■□□□□ 0.81
AP3D1O14617 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.14■□□□□ 0.81
AP3D1O14617 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 MIR4466-201ENST00000606121 54 ntBASIC20.14■□□□□ 0.81
AP3D1O14617 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.14■□□□□ 0.81
AP3D1O14617 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
AP3D1O14617 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3D1O14617 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.14■□□□□ 0.81
AP3D1O14617 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.13■□□□□ 0.81
AP3D1O14617 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
AP3D1O14617 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3D1O14617 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms