Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPEO14579 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COPEO14579 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPEO14579 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPEO14579 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.65■■□□□ 1.06
COPEO14579 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
COPEO14579 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.64■■□□□ 1.06
COPEO14579 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
COPEO14579 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COPEO14579 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPEO14579 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.64■■□□□ 1.05
COPEO14579 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.64■■□□□ 1.05
COPEO14579 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPEO14579 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPEO14579 AL031848.2-201ENST00000607670 837 ntBASIC21.64■■□□□ 1.05
COPEO14579 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.64■■□□□ 1.05
COPEO14579 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COPEO14579 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
COPEO14579 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPEO14579 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPEO14579 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
COPEO14579 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPEO14579 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.63■■□□□ 1.05
COPEO14579 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.63■■□□□ 1.05
COPEO14579 AC021242.3-201ENST00000607598 1377 ntBASIC21.63■■□□□ 1.05
COPEO14579 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
COPEO14579 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPEO14579 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
COPEO14579 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COPEO14579 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
COPEO14579 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.63■■□□□ 1.05
COPEO14579 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.63■■□□□ 1.05
COPEO14579 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.63■■□□□ 1.05
COPEO14579 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.63■■□□□ 1.05
COPEO14579 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPEO14579 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPEO14579 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPEO14579 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPEO14579 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPEO14579 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
COPEO14579 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPEO14579 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPEO14579 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.62■■□□□ 1.05
COPEO14579 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.62■■□□□ 1.05
COPEO14579 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COPEO14579 AC012354.3-201ENST00000623734 483 ntBASIC21.62■■□□□ 1.05
COPEO14579 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COPEO14579 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPEO14579 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPEO14579 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COPEO14579 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COPEO14579 AC009102.2-201ENST00000606772 1639 ntBASIC21.62■■□□□ 1.05
COPEO14579 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.61■■□□□ 1.05
COPEO14579 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.61■■□□□ 1.05
COPEO14579 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPEO14579 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPEO14579 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.61■■□□□ 1.05
COPEO14579 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.61■■□□□ 1.05
COPEO14579 AL033527.3-201ENST00000566366 1196 ntBASIC21.61■■□□□ 1.05
COPEO14579 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPEO14579 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.61■■□□□ 1.05
COPEO14579 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
COPEO14579 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.6■■□□□ 1.05
COPEO14579 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
COPEO14579 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPEO14579 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.6■■□□□ 1.05
COPEO14579 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.6■■□□□ 1.05
COPEO14579 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPEO14579 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COPEO14579 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPEO14579 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COPEO14579 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPEO14579 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPEO14579 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPEO14579 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
COPEO14579 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPEO14579 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COPEO14579 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPEO14579 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COPEO14579 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.59■■□□□ 1.05
COPEO14579 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPEO14579 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
COPEO14579 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPEO14579 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.59■■□□□ 1.05
COPEO14579 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.59■■□□□ 1.05
COPEO14579 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPEO14579 Z98882.1-201ENST00000622160 2253 ntBASIC21.59■■□□□ 1.05
COPEO14579 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.59■■□□□ 1.05
COPEO14579 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COPEO14579 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COPEO14579 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.58■■□□□ 1.05
COPEO14579 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.58■■□□□ 1.05
COPEO14579 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COPEO14579 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COPEO14579 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.58■■□□□ 1.05
COPEO14579 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COPEO14579 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COPEO14579 BX664725.1-201ENST00000438252 379 ntBASIC21.58■■□□□ 1.05
COPEO14579 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.58■■□□□ 1.05
COPEO14579 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms