Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.7■□□□□ 0.9
RTCAO00442 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTCAO00442 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCAO00442 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTCAO00442 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.69■□□□□ 0.9
RTCAO00442 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCAO00442 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCAO00442 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTCAO00442 AC233992.3-201ENST00000607491 485 ntBASIC20.69■□□□□ 0.9
RTCAO00442 AC068587.7-201ENST00000641602 218 ntBASIC20.69■□□□□ 0.9
RTCAO00442 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCAO00442 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCAO00442 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RTCAO00442 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.69■□□□□ 0.9
RTCAO00442 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCAO00442 AC092053.2-201ENST00000640557 1818 ntBASIC20.69■□□□□ 0.9
RTCAO00442 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.69■□□□□ 0.9
RTCAO00442 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCAO00442 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RTCAO00442 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCAO00442 AC010141.3-201ENST00000456659 717 ntBASIC20.68■□□□□ 0.9
RTCAO00442 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTCAO00442 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.68■□□□□ 0.9
RTCAO00442 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.68■□□□□ 0.9
RTCAO00442 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTCAO00442 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTCAO00442 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RTCAO00442 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.68■□□□□ 0.9
RTCAO00442 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTCAO00442 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCAO00442 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTCAO00442 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCAO00442 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCAO00442 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCAO00442 AP001330.3-201ENST00000520123 633 ntBASIC20.67■□□□□ 0.9
RTCAO00442 AC079089.2-201ENST00000531211 1277 ntBASIC20.67■□□□□ 0.9
RTCAO00442 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.67■□□□□ 0.9
RTCAO00442 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.67■□□□□ 0.9
RTCAO00442 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RTCAO00442 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCAO00442 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTCAO00442 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RTCAO00442 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RTCAO00442 AC099791.1-201ENST00000416440 715 ntBASIC20.66■□□□□ 0.9
RTCAO00442 AP005435.1-201ENST00000529293 1178 ntBASIC20.66■□□□□ 0.9
RTCAO00442 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTCAO00442 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTCAO00442 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.66■□□□□ 0.9
RTCAO00442 AC126544.1-201ENST00000580842 1059 ntBASIC20.66■□□□□ 0.9
RTCAO00442 AL031432.3-201ENST00000607698 485 ntBASIC20.66■□□□□ 0.9
RTCAO00442 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTCAO00442 AC087239.1-201ENST00000622671 572 ntBASIC20.66■□□□□ 0.9
RTCAO00442 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.66■□□□□ 0.9
RTCAO00442 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RTCAO00442 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCAO00442 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCAO00442 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCAO00442 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCAO00442 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCAO00442 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCAO00442 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.65■□□□□ 0.9
RTCAO00442 LINC00565-201ENST00000562710 2331 ntBASIC20.65■□□□□ 0.9
RTCAO00442 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCAO00442 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RTCAO00442 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTCAO00442 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.65■□□□□ 0.9
RTCAO00442 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTCAO00442 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RTCAO00442 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCAO00442 EDA-201ENST00000338901 1233 ntBASIC20.65■□□□□ 0.9
RTCAO00442 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTCAO00442 AF213884.3-201ENST00000563833 479 ntBASIC20.65■□□□□ 0.9
RTCAO00442 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.65■□□□□ 0.9
RTCAO00442 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.65■□□□□ 0.9
RTCAO00442 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCAO00442 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCAO00442 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTCAO00442 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.64■□□□□ 0.9
RTCAO00442 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.64■□□□□ 0.9
RTCAO00442 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 AL355001.2-201ENST00000620617 1191 ntBASIC20.64■□□□□ 0.89
RTCAO00442 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.64■□□□□ 0.89
RTCAO00442 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RTCAO00442 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RTCAO00442 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RTCAO00442 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCAO00442 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RTCAO00442 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RTCAO00442 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RTCAO00442 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms