Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC005224.4-201ENST00000583262 1652 ntBASIC21.77■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.77■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.77■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.77■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC092437.1-201ENST00000624794 1048 ntBASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.75■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 OR7E47P-201ENST00000546390 1422 ntBASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC004854.2-201ENST00000608450 1441 ntBASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AP004607.4-201ENST00000530158 1459 ntBASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.74■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 KRT19P1-201ENST00000405746 1186 ntBASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC016769.1-201ENST00000409132 1010 ntBASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC004911.1-201ENST00000416316 871 ntBASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.73■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC137761.2-201ENST00000561729 223 ntBASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AL034346.1-201ENST00000568244 1277 ntBASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 AC145350.3-201ENST00000569033 163 ntBASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 KRT18P61-201ENST00000585825 1298 ntBASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 RARRES2P11-201ENST00000635158 484 ntBASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
C1QTNF3-AMACRE9PGA6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C1QTNF3-AMACRE9PGA6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C1QTNF3-AMACRE9PGA6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
C1QTNF3-AMACRE9PGA6 AP004607.7-201ENST00000527152 1677 ntBASIC21.7■■□□□ 1.06
C1QTNF3-AMACRE9PGA6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms