Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD3L5A6NJ08 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 KRT87P-202ENST00000534226 1464 ntBASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MBD3L5A6NJ08 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 AC080038.1-201ENST00000611274 1154 ntBASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.16■□□□□ 0.66
MBD3L5A6NJ08 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 KRT18P11-201ENST00000435214 1283 ntBASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 AC055733.4-201ENST00000638462 1354 ntBASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L5A6NJ08 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.14■□□□□ 0.66
MBD3L5A6NJ08 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 BID-214ENST00000617586 542 ntTSL 5 BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 OR7E47P-201ENST00000546390 1422 ntBASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L5A6NJ08 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 AL034346.1-201ENST00000568244 1277 ntBASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 ESRRAP2-201ENST00000418437 1549 ntBASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 AP004607.7-201ENST00000527152 1677 ntBASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3L5A6NJ08 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MBD3L5A6NJ08 LINC00526-201ENST00000581067 1875 ntBASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 RAP2CP1-201ENST00000605103 478 ntBASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 AC104187.1-201ENST00000607510 612 ntBASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 AC073111.5-205ENST00000641717 521 ntBASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 DUSP8P5-201ENST00000422884 1815 ntBASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3L5A6NJ08 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms