Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AC133637.1-201ENST00000624115 1537 ntBASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF25A6NGN4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 MIR4767-201ENST00000582827 78 ntBASIC20.33■□□□□ 0.85
PRAMEF25A6NGN4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF25A6NGN4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF25A6NGN4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF25A6NGN4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PRAMEF25A6NGN4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF25A6NGN4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF25A6NGN4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF25A6NGN4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
PRAMEF25A6NGN4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.32■□□□□ 0.84
PRAMEF25A6NGN4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF25A6NGN4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 LINC01960-201ENST00000563759 1884 ntBASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PRAMEF25A6NGN4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF25A6NGN4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 AC010542.4-201ENST00000563151 1910 ntBASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 AC026310.3-201ENST00000625186 2373 ntBASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 AC133561.4-201ENST00000566112 224 ntBASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF25A6NGN4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 EDA-201ENST00000338901 1233 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms