Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.37■■□□□ 1.33
SMIM28A0A1B0GU29 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 LINC00526-201ENST00000581067 1875 ntBASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMIM28A0A1B0GU29 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 AC005224.4-201ENST00000583262 1652 ntBASIC23.35■■□□□ 1.33
SMIM28A0A1B0GU29 AC009237.3-201ENST00000393279 1427 ntBASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 AC092437.1-201ENST00000624794 1048 ntBASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 AP004607.4-201ENST00000530158 1459 ntBASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMIM28A0A1B0GU29 AC137767.1-201ENST00000602918 1920 ntBASIC23.33■■□□□ 1.33
SMIM28A0A1B0GU29 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SMIM28A0A1B0GU29 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SMIM28A0A1B0GU29 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMIM28A0A1B0GU29 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.33■■□□□ 1.33
SMIM28A0A1B0GU29 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.33■■□□□ 1.33
SMIM28A0A1B0GU29 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
SMIM28A0A1B0GU29 OR7E47P-201ENST00000546390 1422 ntBASIC23.33■■□□□ 1.32
SMIM28A0A1B0GU29 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 AC004854.2-201ENST00000608450 1441 ntBASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMIM28A0A1B0GU29 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 C9orf163-202ENST00000624034 2573 ntBASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMIM28A0A1B0GU29 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
SMIM28A0A1B0GU29 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMIM28A0A1B0GU29 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMIM28A0A1B0GU29 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMIM28A0A1B0GU29 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.3■■□□□ 1.32
SMIM28A0A1B0GU29 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.3■■□□□ 1.32
SMIM28A0A1B0GU29 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SMIM28A0A1B0GU29 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMIM28A0A1B0GU29 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMIM28A0A1B0GU29 AP004607.7-201ENST00000527152 1677 ntBASIC23.29■■□□□ 1.32
SMIM28A0A1B0GU29 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms