Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 AC137767.1-201ENST00000602918 1920 ntBASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 AC233723.2-201ENST00000623798 2106 ntBASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV41A0A0B4J266 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 AC105233.4-201ENST00000642045 216 ntBASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TRAV41A0A0B4J266 OR7E47P-201ENST00000546390 1422 ntBASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV41A0A0B4J266 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 ZNRF2P3-201ENST00000424200 374 ntBASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV41A0A0B4J266 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 AC133561.1-201ENST00000568600 2415 ntBASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 AC139530.1-201ENST00000575312 1977 ntBASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAV41A0A0B4J266 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV41A0A0B4J266 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV41A0A0B4J266 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
TRAV41A0A0B4J266 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV41A0A0B4J266 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRAV41A0A0B4J266 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV41A0A0B4J266 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV41A0A0B4J266 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV41A0A0B4J266 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms