Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 DUX4L18-201ENST00000553347 1267 ntBASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 AC004687.1-201ENST00000579003 1625 ntBASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 AC005703.6-201ENST00000623265 1329 ntBASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRAV1-2A0A0B4J238 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV1-2A0A0B4J238 AL157384.1-201ENST00000445995 2473 ntBASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV1-2A0A0B4J238 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAV1-2A0A0B4J238 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV1-2A0A0B4J238 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV1-2A0A0B4J238 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV1-2A0A0B4J238 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAV1-2A0A0B4J238 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 BHLHE23-202ENST00000612929 1109 ntBASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 PVT1_1.1-201ENST00000615125 194 ntBASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRAV1-2A0A0B4J238 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 MIR6722-201ENST00000617286 78 ntBASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV1-2A0A0B4J238 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRAV1-2A0A0B4J238 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV1-2A0A0B4J238 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV1-2A0A0B4J238 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV1-2A0A0B4J238 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV1-2A0A0B4J238 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV1-2A0A0B4J238 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV1-2A0A0B4J238 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV1-2A0A0B4J238 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms