Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 FBXW4P1-201ENST00000426721 2239 ntBASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 GUSBP5-201ENST00000418136 578 ntBASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 AC006455.2-201ENST00000429931 906 ntBASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-2A0A0B4J237 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-2A0A0B4J237 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-2A0A0B4J237 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 AL356740.2-201ENST00000601559 647 ntBASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 pRNA.6-201ENST00000610482 90 ntBASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 pRNA.5-201ENST00000612139 90 ntBASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 pRNA.11-201ENST00000618423 90 ntBASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 pRNA.13-201ENST00000619112 90 ntBASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TRAV8-2A0A0B4J237 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 AC133637.1-201ENST00000624115 1537 ntBASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 MIR3621-201ENST00000580529 85 ntBASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 AC099791.2-201ENST00000605725 427 ntBASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV8-2A0A0B4J237 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 AC010542.4-201ENST00000563151 1910 ntBASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms