Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CDK20-203ENST00000375871 1907 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 PRAMEF14-201ENST00000334600 1690 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 STRADA-253ENST00000640979 2086 ntTSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 LYPD5-201ENST00000377950 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AL512378.1-201ENST00000394808 2100 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 EME1-201ENST00000338165 2339 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 PPP1R2P10-201ENST00000393023 595 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 MPDU1-203ENST00000396501 1125 ntTSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 U3.41-201ENST00000408711 219 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC006987.4-201ENST00000430032 279 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 SCLT1-202ENST00000439369 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC012513.2-201ENST00000441511 1137 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 CTSLP1-201ENST00000457530 1002 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC105424.1-201ENST00000514583 209 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 NT5CP1-201ENST00000554092 509 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 RN7SL732P-201ENST00000581157 300 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC090844.3-201ENST00000583462 784 ntTSL 3 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC112236.2-201ENST00000608402 845 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 U62317.4-201ENST00000609758 448 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 MIR6125-201ENST00000618986 96 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC016831.5-201ENST00000605249 1998 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC105219.4-201ENST00000529743 1809 ntTSL 3 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 KRT8P46-201ENST00000512037 1426 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 AC106785.2-201ENST00000564385 1319 ntBASIC11.35□□□□□ -0.59
NPIPA3F8WFD2 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 MVK-202ENST00000392727 1770 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 IQCD-202ENST00000416617 1673 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms