Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CNTF-201ENST00000361987 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 FTH1P19-201ENST00000402402 528 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC064836.1-201ENST00000405197 704 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 PHBP3-201ENST00000412562 819 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 BX088651.3-201ENST00000418155 352 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 IGKV1OR-2-201ENST00000457995 350 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 RN7SL477P-201ENST00000488440 286 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC093367.1-201ENST00000517332 420 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC126471.1-201ENST00000550676 362 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC015911.7-201ENST00000587542 958 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 CALM3-206ENST00000594523 540 ntTSL 4 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 AC106774.4-201ENST00000600799 409 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 PARGP1-201ENST00000417555 2286 ntBASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 C16orf46-202ENST00000378611 1857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
NPIPA3F8WFD2 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 SNORA52-201ENST00000362915 134 ntBASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 FAM45BP-201ENST00000408950 1074 ntBASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ACRBP-202ENST00000414226 1700 ntTSL 2 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 LINC01503-201ENST00000423122 545 ntTSL 2 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 RBMXP2-201ENST00000434705 1168 ntBASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 SLC25A15P1-201ENST00000456738 342 ntBASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 TPST2P1-201ENST00000564073 1102 ntBASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms