Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 AL022069.1-201ENST00000568025 1636 ntBASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 KRT16P3-201ENST00000439127 1283 ntBASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 AL356441.2-201ENST00000443009 864 ntBASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 AC010997.5-201ENST00000609182 354 ntBASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4B1Q9Y6B7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 MIR6722-201ENST00000617286 78 ntBASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 AC131274.2-201ENST00000580697 1507 ntBASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4B1Q9Y6B7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
AP4B1Q9Y6B7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.77■□□□□ 0.91
AP4B1Q9Y6B7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
AP4B1Q9Y6B7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.76■□□□□ 0.91
AP4B1Q9Y6B7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 RNF165-205ENST00000588679 2904 ntBASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP4B1Q9Y6B7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 AC010542.4-201ENST00000563151 1910 ntBASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP4B1Q9Y6B7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP4B1Q9Y6B7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP4B1Q9Y6B7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4B1Q9Y6B7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
AP4B1Q9Y6B7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.72■□□□□ 0.91
AP4B1Q9Y6B7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP4B1Q9Y6B7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
AP4B1Q9Y6B7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms