Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC092053.2-201ENST00000640557 1818 ntBASIC20.47■□□□□ 0.87
GPC6Q9Y625 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC6Q9Y625 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
GPC6Q9Y625 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC6Q9Y625 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
GPC6Q9Y625 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC6Q9Y625 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
GPC6Q9Y625 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GPC6Q9Y625 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC6Q9Y625 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC6Q9Y625 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
GPC6Q9Y625 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPC6Q9Y625 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPC6Q9Y625 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.46■□□□□ 0.87
GPC6Q9Y625 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.46■□□□□ 0.87
GPC6Q9Y625 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.46■□□□□ 0.87
GPC6Q9Y625 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPC6Q9Y625 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GPC6Q9Y625 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.46■□□□□ 0.87
GPC6Q9Y625 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPC6Q9Y625 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPC6Q9Y625 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
GPC6Q9Y625 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
GPC6Q9Y625 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
GPC6Q9Y625 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.45■□□□□ 0.86
GPC6Q9Y625 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.45■□□□□ 0.86
GPC6Q9Y625 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
GPC6Q9Y625 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
GPC6Q9Y625 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC6Q9Y625 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC6Q9Y625 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.44■□□□□ 0.86
GPC6Q9Y625 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC6Q9Y625 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC6Q9Y625 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC6Q9Y625 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GPC6Q9Y625 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GPC6Q9Y625 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.44■□□□□ 0.86
GPC6Q9Y625 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC6Q9Y625 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.44■□□□□ 0.86
GPC6Q9Y625 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GPC6Q9Y625 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
GPC6Q9Y625 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC6Q9Y625 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC6Q9Y625 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.43■□□□□ 0.86
GPC6Q9Y625 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC6Q9Y625 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC6Q9Y625 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC6Q9Y625 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
GPC6Q9Y625 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC6Q9Y625 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC6Q9Y625 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.42■□□□□ 0.86
GPC6Q9Y625 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC6Q9Y625 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC6Q9Y625 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC6Q9Y625 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
GPC6Q9Y625 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC6Q9Y625 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.42■□□□□ 0.86
GPC6Q9Y625 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC6Q9Y625 AL137060.1-201ENST00000618151 2648 ntBASIC20.41■□□□□ 0.86
GPC6Q9Y625 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC6Q9Y625 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.41■□□□□ 0.86
GPC6Q9Y625 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
GPC6Q9Y625 C17orf82-201ENST00000623772 1530 ntBASIC20.41■□□□□ 0.86
GPC6Q9Y625 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC6Q9Y625 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms