Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 DUX4L4-201ENST00000566884 1269 ntBASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB6Q9Y5F9 SLC25A24-204ENST00000569674 2357 ntBASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 AC126544.1-201ENST00000580842 1059 ntBASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGB6Q9Y5F9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 AC133637.1-201ENST00000624115 1537 ntBASIC20.43■□□□□ 0.86
PCDHGB6Q9Y5F9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGB6Q9Y5F9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 DUSP8P3-201ENST00000399571 1760 ntBASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
PCDHGB6Q9Y5F9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 SLC47A1P1-202ENST00000449666 945 ntBASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.4■□□□□ 0.86
PCDHGB6Q9Y5F9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGB6Q9Y5F9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGB6Q9Y5F9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PCDHGB6Q9Y5F9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGB6Q9Y5F9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 AC087623.3-201ENST00000607047 1098 ntBASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGB6Q9Y5F9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 OR2I1P-207ENST00000453522 948 ntBASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 IGHV3-19-201ENST00000521488 291 ntBASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms