Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 AC005181.1-201ENST00000604782 1256 ntBASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC30.99■■■□□ 2.55
NRXN3Q9Y4C0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
NRXN3Q9Y4C0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC30.98■■■□□ 2.55
NRXN3Q9Y4C0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC30.98■■■□□ 2.55
NRXN3Q9Y4C0 AC004812.2-201ENST00000611079 2094 ntBASIC30.98■■■□□ 2.55
NRXN3Q9Y4C0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC30.97■■■□□ 2.55
NRXN3Q9Y4C0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.97■■■□□ 2.55
NRXN3Q9Y4C0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.97■■■□□ 2.55
NRXN3Q9Y4C0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC30.97■■■□□ 2.55
NRXN3Q9Y4C0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC30.97■■■□□ 2.55
NRXN3Q9Y4C0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NRXN3Q9Y4C0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC30.97■■■□□ 2.55
NRXN3Q9Y4C0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC30.97■■■□□ 2.55
NRXN3Q9Y4C0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.96■■■□□ 2.55
NRXN3Q9Y4C0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
NRXN3Q9Y4C0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.95■■■□□ 2.54
NRXN3Q9Y4C0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC30.95■■■□□ 2.54
NRXN3Q9Y4C0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30.95■■■□□ 2.54
NRXN3Q9Y4C0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
NRXN3Q9Y4C0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
NRXN3Q9Y4C0 AC083906.2-201ENST00000511578 360 ntBASIC30.94■■■□□ 2.54
NRXN3Q9Y4C0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC30.94■■■□□ 2.54
NRXN3Q9Y4C0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC30.94■■■□□ 2.54
NRXN3Q9Y4C0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
NRXN3Q9Y4C0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NRXN3Q9Y4C0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NRXN3Q9Y4C0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NRXN3Q9Y4C0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC30.93■■■□□ 2.54
NRXN3Q9Y4C0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC30.93■■■□□ 2.54
NRXN3Q9Y4C0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NRXN3Q9Y4C0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC30.93■■■□□ 2.54
NRXN3Q9Y4C0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NRXN3Q9Y4C0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NRXN3Q9Y4C0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 APTR-203ENST00000430801 583 ntTSL 5 BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC30.92■■■□□ 2.54
NRXN3Q9Y4C0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 AC007322.1-201ENST00000426983 750 ntBASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 DUSP8P5-201ENST00000422884 1815 ntBASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 AC009237.3-201ENST00000393279 1427 ntBASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC30.91■■■□□ 2.54
NRXN3Q9Y4C0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.9■■■□□ 2.54
NRXN3Q9Y4C0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NRXN3Q9Y4C0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NRXN3Q9Y4C0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
NRXN3Q9Y4C0 AC055733.4-201ENST00000638462 1354 ntBASIC30.89■■■□□ 2.54
NRXN3Q9Y4C0 AC010141.2-201ENST00000452426 721 ntBASIC30.89■■■□□ 2.54
NRXN3Q9Y4C0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
NRXN3Q9Y4C0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
NRXN3Q9Y4C0 AC020928.2-201ENST00000588717 2197 ntBASIC30.89■■■□□ 2.53
NRXN3Q9Y4C0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC30.88■■■□□ 2.53
NRXN3Q9Y4C0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC30.88■■■□□ 2.53
NRXN3Q9Y4C0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NRXN3Q9Y4C0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC30.88■■■□□ 2.53
NRXN3Q9Y4C0 AL139125.2-201ENST00000623134 1869 ntBASIC30.88■■■□□ 2.53
NRXN3Q9Y4C0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC30.87■■■□□ 2.53
NRXN3Q9Y4C0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC30.87■■■□□ 2.53
NRXN3Q9Y4C0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms