Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTCBQ9Y3I0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTCBQ9Y3I0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
RTCBQ9Y3I0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTCBQ9Y3I0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
RTCBQ9Y3I0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTCBQ9Y3I0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
RTCBQ9Y3I0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RTCBQ9Y3I0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RTCBQ9Y3I0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.76■■■□□ 2.03
RTCBQ9Y3I0 MYCNOS-205ENST00000641950 531 ntBASIC27.76■■■□□ 2.03
RTCBQ9Y3I0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.76■■■□□ 2.03
RTCBQ9Y3I0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 AC069152.1-201ENST00000438030 544 ntBASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC27.75■■■□□ 2.03
RTCBQ9Y3I0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
RTCBQ9Y3I0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
RTCBQ9Y3I0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC27.74■■■□□ 2.03
RTCBQ9Y3I0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RTCBQ9Y3I0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
RTCBQ9Y3I0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 FAM201B-201ENST00000458407 597 ntBASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 AP001160.3-201ENST00000601484 763 ntBASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RTCBQ9Y3I0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 AC133041.1-202ENST00000642053 222 ntBASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RTCBQ9Y3I0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTCBQ9Y3I0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.71■■■□□ 2.03
RTCBQ9Y3I0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTCBQ9Y3I0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.71■■■□□ 2.03
RTCBQ9Y3I0 AF201337.1-201ENST00000520239 748 ntBASIC27.7■■■□□ 2.02
RTCBQ9Y3I0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.7■■■□□ 2.02
RTCBQ9Y3I0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RTCBQ9Y3I0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.7■■■□□ 2.02
RTCBQ9Y3I0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
RTCBQ9Y3I0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 AC073210.2-201ENST00000430369 194 ntBASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RTCBQ9Y3I0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 CNN2P6-201ENST00000439038 900 ntBASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.68■■■□□ 2.02
RTCBQ9Y3I0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.67■■■□□ 2.02
RTCBQ9Y3I0 AC105036.2-201ENST00000569468 176 ntBASIC27.67■■■□□ 2.02
RTCBQ9Y3I0 AC133552.2-202ENST00000575694 574 ntBASIC27.67■■■□□ 2.02
RTCBQ9Y3I0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.67■■■□□ 2.02
RTCBQ9Y3I0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTCBQ9Y3I0 DUSP8P3-201ENST00000399571 1760 ntBASIC27.67■■■□□ 2.02
RTCBQ9Y3I0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTCBQ9Y3I0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTCBQ9Y3I0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms