Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 NTF6G-201ENST00000591094 616 ntBASIC20.58■□□□□ 0.89
SRPK3Q9UPE1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRPK3Q9UPE1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.58■□□□□ 0.88
SRPK3Q9UPE1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRPK3Q9UPE1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.58■□□□□ 0.88
SRPK3Q9UPE1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
SRPK3Q9UPE1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRPK3Q9UPE1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 AC079089.2-201ENST00000531211 1277 ntBASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRPK3Q9UPE1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SRPK3Q9UPE1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 AC009237.3-201ENST00000393279 1427 ntBASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 AC022517.1-201ENST00000592429 346 ntBASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 RARRES2P11-201ENST00000635158 484 ntBASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRPK3Q9UPE1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRPK3Q9UPE1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRPK3Q9UPE1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.52■□□□□ 0.88
SRPK3Q9UPE1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRPK3Q9UPE1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.52■□□□□ 0.88
SRPK3Q9UPE1 AL137784.2-201ENST00000607332 1000 ntBASIC20.52■□□□□ 0.88
SRPK3Q9UPE1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.52■□□□□ 0.88
SRPK3Q9UPE1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SRPK3Q9UPE1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SRPK3Q9UPE1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.52■□□□□ 0.87
SRPK3Q9UPE1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRPK3Q9UPE1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms