Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSMCE4AQ9NXX6 AL356740.2-201ENST00000601559 647 ntBASIC21.75■■□□□ 1.07
NSMCE4AQ9NXX6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.75■■□□□ 1.07
NSMCE4AQ9NXX6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSMCE4AQ9NXX6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSMCE4AQ9NXX6 AC133637.1-201ENST00000624115 1537 ntBASIC21.75■■□□□ 1.07
NSMCE4AQ9NXX6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSMCE4AQ9NXX6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 AL031602.1-201ENST00000633169 911 ntBASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSMCE4AQ9NXX6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NSMCE4AQ9NXX6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 pRNA.6-201ENST00000610482 90 ntBASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 pRNA.5-201ENST00000612139 90 ntBASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 pRNA.11-201ENST00000618423 90 ntBASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 pRNA.13-201ENST00000619112 90 ntBASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NSMCE4AQ9NXX6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 AC010542.4-201ENST00000563151 1910 ntBASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 AL035685.1-201ENST00000636663 812 ntBASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 AC068587.7-201ENST00000641602 218 ntBASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.71■■□□□ 1.07
NSMCE4AQ9NXX6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NSMCE4AQ9NXX6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.7■■□□□ 1.07
NSMCE4AQ9NXX6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NSMCE4AQ9NXX6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSMCE4AQ9NXX6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NSMCE4AQ9NXX6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
NSMCE4AQ9NXX6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
NSMCE4AQ9NXX6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.7■■□□□ 1.06
NSMCE4AQ9NXX6 AC092171.4-201ENST00000609130 632 ntBASIC21.7■■□□□ 1.06
NSMCE4AQ9NXX6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSMCE4AQ9NXX6 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 MIR3621-201ENST00000580529 85 ntBASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NSMCE4AQ9NXX6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 AC006455.2-201ENST00000429931 906 ntBASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 AC079089.2-201ENST00000531211 1277 ntBASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 AC099791.2-201ENST00000605725 427 ntBASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 AC007375.3-201ENST00000600936 2314 ntBASIC21.68■■□□□ 1.06
NSMCE4AQ9NXX6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NSMCE4AQ9NXX6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.67■■□□□ 1.06
NSMCE4AQ9NXX6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NSMCE4AQ9NXX6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.67■■□□□ 1.06
NSMCE4AQ9NXX6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NSMCE4AQ9NXX6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.67■■□□□ 1.06
NSMCE4AQ9NXX6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms