Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 RPS6P14-201ENST00000425165 719 ntBASIC24.49■■□□□ 1.51
RNF216Q9NWF9 AC087623.3-201ENST00000607047 1098 ntBASIC24.49■■□□□ 1.51
RNF216Q9NWF9 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF216Q9NWF9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.48■■□□□ 1.51
RNF216Q9NWF9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF216Q9NWF9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF216Q9NWF9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
RNF216Q9NWF9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF216Q9NWF9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF216Q9NWF9 KRT8P2-201ENST00000556193 944 ntBASIC24.48■■□□□ 1.51
RNF216Q9NWF9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF216Q9NWF9 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC24.48■■□□□ 1.51
RNF216Q9NWF9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF216Q9NWF9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
RNF216Q9NWF9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF216Q9NWF9 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF216Q9NWF9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
RNF216Q9NWF9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF216Q9NWF9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 AL162430.1-201ENST00000480705 870 ntBASIC24.46■■□□□ 1.51
RNF216Q9NWF9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 AC022960.2-201ENST00000616300 666 ntBASIC24.46■■□□□ 1.51
RNF216Q9NWF9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 AL356094.1-201ENST00000624663 1212 ntBASIC24.46■■□□□ 1.51
RNF216Q9NWF9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF216Q9NWF9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RNF216Q9NWF9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 TMF1P1-201ENST00000576058 373 ntBASIC24.45■■□□□ 1.5
RNF216Q9NWF9 AC027348.2-201ENST00000624375 642 ntBASIC24.45■■□□□ 1.5
RNF216Q9NWF9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.45■■□□□ 1.5
RNF216Q9NWF9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF216Q9NWF9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF216Q9NWF9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF216Q9NWF9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 FP325331.1-202ENST00000623531 1380 ntBASIC24.42■■□□□ 1.5
RNF216Q9NWF9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 AC034268.1-201ENST00000441047 882 ntBASIC24.42■■□□□ 1.5
RNF216Q9NWF9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 AL358852.1-201ENST00000623174 1268 ntBASIC24.42■■□□□ 1.5
RNF216Q9NWF9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF216Q9NWF9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms