Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC004812.2-201ENST00000611079 2094 ntBASIC31.58■■■□□ 2.65
SLC52A1Q9NWF4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
SLC52A1Q9NWF4 TSPY20P-201ENST00000450910 630 ntBASIC31.58■■■□□ 2.65
SLC52A1Q9NWF4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
SLC52A1Q9NWF4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
SLC52A1Q9NWF4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC52A1Q9NWF4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 MYCNOS-205ENST00000641950 531 ntBASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SLC52A1Q9NWF4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SLC52A1Q9NWF4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC31.55■■■□□ 2.64
SLC52A1Q9NWF4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.55■■■□□ 2.64
SLC52A1Q9NWF4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
SLC52A1Q9NWF4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
SLC52A1Q9NWF4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
SLC52A1Q9NWF4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
SLC52A1Q9NWF4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC31.54■■■□□ 2.64
SLC52A1Q9NWF4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC31.54■■■□□ 2.64
SLC52A1Q9NWF4 AL138781.1-201ENST00000566567 1274 ntBASIC31.54■■■□□ 2.64
SLC52A1Q9NWF4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31.54■■■□□ 2.64
SLC52A1Q9NWF4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SLC52A1Q9NWF4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SLC52A1Q9NWF4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 AP001160.3-201ENST00000601484 763 ntBASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC31.53■■■□□ 2.64
SLC52A1Q9NWF4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC52A1Q9NWF4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC52A1Q9NWF4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC52A1Q9NWF4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC52A1Q9NWF4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
SLC52A1Q9NWF4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC31.52■■■□□ 2.64
SLC52A1Q9NWF4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC52A1Q9NWF4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC52A1Q9NWF4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
SLC52A1Q9NWF4 AC073210.2-201ENST00000430369 194 ntBASIC31.51■■■□□ 2.63
SLC52A1Q9NWF4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC31.51■■■□□ 2.63
SLC52A1Q9NWF4 AC066615.1-201ENST00000640911 628 ntBASIC31.51■■■□□ 2.63
SLC52A1Q9NWF4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 AC055733.4-201ENST00000638462 1354 ntBASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC31.5■■■□□ 2.63
SLC52A1Q9NWF4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 CNN2P6-201ENST00000439038 900 ntBASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 LINC01124-201ENST00000409786 2117 ntBASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SLC52A1Q9NWF4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SLC52A1Q9NWF4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SLC52A1Q9NWF4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SLC52A1Q9NWF4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC31.48■■■□□ 2.63
SLC52A1Q9NWF4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31.48■■■□□ 2.63
SLC52A1Q9NWF4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 SLC29A4P1-201ENST00000398760 971 ntBASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms