Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIN7CQ9NUP9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LIN7CQ9NUP9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.02■□□□□ 0.48
LIN7CQ9NUP9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
LIN7CQ9NUP9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LIN7CQ9NUP9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LIN7CQ9NUP9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LIN7CQ9NUP9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LIN7CQ9NUP9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LIN7CQ9NUP9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 LINC01960-201ENST00000563759 1884 ntBASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LIN7CQ9NUP9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18■□□□□ 0.47
LIN7CQ9NUP9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LIN7CQ9NUP9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 SRR-208ENST00000576848 588 ntTSL 4 BASIC18■□□□□ 0.47
LIN7CQ9NUP9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18■□□□□ 0.47
LIN7CQ9NUP9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18■□□□□ 0.47
LIN7CQ9NUP9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18■□□□□ 0.47
LIN7CQ9NUP9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIN7CQ9NUP9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIN7CQ9NUP9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.97■□□□□ 0.47
LIN7CQ9NUP9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms