Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.21■□□□□ 0.5
Q9N2K0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.2■□□□□ 0.5
Q9N2K0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Q9N2K0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.2■□□□□ 0.5
Q9N2K0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 AL499627.2-201ENST00000606283 725 ntBASIC18.2■□□□□ 0.5
Q9N2K0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Q9N2K0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.2■□□□□ 0.5
Q9N2K0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q9N2K0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.19■□□□□ 0.5
Q9N2K0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 TSPY9P-201ENST00000440215 945 ntBASIC18.19■□□□□ 0.5
Q9N2K0 TSPY11P-201ENST00000442607 1045 ntBASIC18.19■□□□□ 0.5
Q9N2K0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.19■□□□□ 0.5
Q9N2K0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q9N2K0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Q9N2K0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q9N2K0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q9N2K0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q9N2K0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Q9N2K0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Q9N2K0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Q9N2K0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Q9N2K0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.18■□□□□ 0.5
Q9N2K0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Q9N2K0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Q9N2K0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.18■□□□□ 0.5
Q9N2K0 AC026310.3-201ENST00000625186 2373 ntBASIC18.18■□□□□ 0.5
Q9N2K0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.18■□□□□ 0.5
Q9N2K0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Q9N2K0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q9N2K0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q9N2K0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Q9N2K0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Q9N2K0 RARRES2P1-201ENST00000474487 481 ntBASIC18.17■□□□□ 0.5
Q9N2K0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q9N2K0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q9N2K0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q9N2K0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Q9N2K0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q9N2K0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.16■□□□□ 0.5
Q9N2K0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.16■□□□□ 0.5
Q9N2K0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.16■□□□□ 0.5
Q9N2K0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.16■□□□□ 0.5
Q9N2K0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q9N2K0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 AC009299.2-201ENST00000482477 511 ntBASIC18.15■□□□□ 0.5
Q9N2K0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.15■□□□□ 0.5
Q9N2K0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.15■□□□□ 0.5
Q9N2K0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Q9N2K0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.15■□□□□ 0.5
Q9N2K0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Q9N2K0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q9N2K0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Q9N2K0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Q9N2K0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Q9N2K0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Q9N2K0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Q9N2K0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q9N2K0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Q9N2K0 AL117332.1-201ENST00000622628 974 ntBASIC18.14■□□□□ 0.49
Q9N2K0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.14■□□□□ 0.49
Q9N2K0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms