Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 AC005703.6-201ENST00000623265 1329 ntBASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC4CQ9HCJ2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 LINC01960-201ENST00000563759 1884 ntBASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 MIR6722-201ENST00000617286 78 ntBASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRC4CQ9HCJ2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.27■■□□□ 1.16
LRRC4CQ9HCJ2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
LRRC4CQ9HCJ2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC4CQ9HCJ2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC4CQ9HCJ2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC4CQ9HCJ2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRC4CQ9HCJ2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC4CQ9HCJ2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRC4CQ9HCJ2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 DUX4L4-201ENST00000566884 1269 ntBASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC4CQ9HCJ2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 AL031848.2-201ENST00000607670 837 ntBASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC4CQ9HCJ2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.23■■□□□ 1.15
LRRC4CQ9HCJ2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms