Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SYT6-210ENST00000641643 1587 ntBASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 MIR638-201ENST00000385237 100 ntBASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 PBX2P1-201ENST00000493219 1291 ntBASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEC61A2Q9H9S3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 AC087742.1-201ENST00000575880 1738 ntBASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 AC127496.7-201ENST00000625110 1798 ntBASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 AC092171.4-201ENST00000609130 632 ntBASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEC61A2Q9H9S3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 AC242852.2-201ENST00000615738 1807 ntBASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 AC133637.1-201ENST00000624115 1537 ntBASIC19.41■□□□□ 0.7
SEC61A2Q9H9S3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 MIR3181-201ENST00000578512 73 ntBASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 AC106739.1-201ENST00000617035 715 ntBASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 AC135279.3-201ENST00000610945 1311 ntBASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SEC61A2Q9H9S3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SEC61A2Q9H9S3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SEC61A2Q9H9S3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEC61A2Q9H9S3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 DUX4L19-201ENST00000557448 1267 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms